ggKbase home page

A3-16-all-fractions_k255_2497939

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_2497939_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..453)
DNA (453bp) protein (151aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABE43149.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABE43149.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E93_POLSJ
A3-16-all-fractions_k255_2497939_2
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

839..3082
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037E6668
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ENO77424.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
A3-16-all-fractions_k255_2497939_3
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3082..4254
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SNB6_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC27858.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
A3-16-all-fractions_k255_2497939_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4268..5527
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003488940
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
A3-16-all-fractions_k255_2497939_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5661..6476
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFI1_NITSI
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
A3-16-all-fractions_k255_2497939_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6479..8251
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C3C93
amidohydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
A3-16-all-fractions_k255_2497939_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8332..11133
DNA (2802bp) protein (934aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036DB72E
TPR-like/GAF/GGDEF domain-containing protein {ECO:0000313|EMBL:ELX12294.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
A3-16-all-fractions_k255_2497939_8
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11130..12863)
DNA (1734bp) protein (578aa)
Sulfotransferase n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SXU8_POLSQ
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABP34312.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
A3-16-all-fractions_k255_2497939_9
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12954..14378)
DNA (1425bp) protein (475aa)
O-glycosyl hydrolase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C278_9XANT
O-Glycosyl hydrolase family 30 protein precursor
O-glycosyl hydrolase {ECO:0000313|EMBL:EGD20372.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
A3-16-all-fractions_k255_2497939_10
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..15250
DNA (270bp) protein (90aa)
signal peptide protein n=1 Tax=Rhodocyclaceae RepID=UPI00036E634A
Putative signal peptide protein {ECO:0000313|EMBL:EGF33080.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
signal peptide protein
A3-16-all-fractions_k255_2497939_11
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15285..16115
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037E5BB8
Uncharacterized protein {ECO:0000313|EMBL:EGK70525.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
A3-16-all-fractions_k255_2497939_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16108..16878
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1G2_9NEIS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
A3-16-all-fractions_k255_2497939_13
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16887..17357
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036711E4
Uncharacterized protein {ECO:0000313|EMBL:EGK70527.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
doxX family protein
A3-16-all-fractions_k255_2497939_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17372..17731)
DNA (360bp) protein (120aa)
histidine kinase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287FB25
response regulator CheY
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A3-16-all-fractions_k255_2497939_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17756..19240)
DNA (1485bp) protein (495aa)
circadian clock protein KaiC (EC:2.7.11.1)
recombinase RecA n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289249E
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A3-16-all-fractions_k255_2497939_16
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19237..20028)
DNA (792bp) protein (264aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R4L6_9DELT
sensor histidine kinase
A3-16-all-fractions_k255_2497939_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20223..21941)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D55054
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KIF79847.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
ATP-dependent DNA helicase RecQ
A3-16-all-fractions_k255_2497939_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(21978..22886)
DNA (909bp) protein (303aa)
Ribonuclease BN, putative id=4947013 bin=GWC2_Nitrospirae-rel_56_14 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ribonuclease bn
Tax=GWC2_Nitrospirae_56_14_curated
A3-16-all-fractions_k255_2497939_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22958..23248
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2L347_9BURK
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35751.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ycii-like protein
A3-16-all-fractions_k255_2497939_20
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23245..23820)
DNA (576bp) protein (192aa)
Flavodoxin n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MYG4_9PSED
Flavodoxin {ECO:0000313|EMBL:EIK94254.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
tryptophan repressor binding protein
A3-16-all-fractions_k255_2497939_21
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23920..24828)
DNA (909bp) protein (303aa)
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y690_LEPCP
FliA/WhiG family RNA polymerase sigma 28 subunit
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:ACB33595.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_2497939_22
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25047..25553)
DNA (507bp) protein (169aa)
GAF domain-containing protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUB2_9BURK
GAF domain-containing protein {ECO:0000313|EMBL:EGI76662.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
GAF domain-containing protein
A3-16-all-fractions_k255_2497939_23
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25669..27105
DNA (1437bp) protein (479aa)
hsrA; putative transport protein hsrA
major facilitator superfamily drug efflux transporter id=12498687 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
A3-16-all-fractions_k255_2497939_24
unknown

Not on your lists

comp(27539..27634)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 24 items

View Taxonomy