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A3-16-all-fractions_k255_4416167

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_4416167_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89..1060
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E5J1_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ76712.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
glycosyl transferase family protein
A3-16-all-fractions_k255_4416167_2
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1057..2118
DNA (1062bp) protein (354aa)
NAD-dependent dehydratase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JBD5_9BURK
NAD-dependent dehydratase {ECO:0000313|EMBL:ESJ25236.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
putative sugar-nucleotide epimerase/dehydratase
A3-16-all-fractions_k255_4416167_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2134..2634)
DNA (501bp) protein (167aa)
Hemerythrin HHE cation binding region n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8Y2_NITMU
hemerythrin HHE cation binding protein
Hemerythrin HHE cation binding region {ECO:0000313|EMBL:ABB74789.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
A3-16-all-fractions_k255_4416167_4
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

2782..3210
DNA (429bp) protein (143aa)
GH24370 n=1 Tax=Drosophila grimshawi RepID=B4JM94_DROGR
Uncharacterized protein {ECO:0000313|EMBL:CDJ69218.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
hypothetical protein
A3-16-all-fractions_k255_4416167_5
unknown

Not on your lists

3210..3881
DNA (672bp) protein (224aa)

This feature has no annotations

A3-16-all-fractions_k255_4416167_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3833..4789)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7I8_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34910.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-16-all-fractions_k255_4416167_7

Not on your lists

comp(4823..5599)
DNA (777bp) protein (259aa)
exodeoxyribonuclease III n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037DA256
Exodeoxyribonuclease III {ECO:0000313|EMBL:AHZ45683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
exodeoxyribonuclease III
A3-16-all-fractions_k255_4416167_8
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5786..6055
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X021_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI25768.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
A3-16-all-fractions_k255_4416167_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..6593)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037E1D00
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
A3-16-all-fractions_k255_4416167_10
unknown

Not on your lists

6774..7175
DNA (402bp) protein (134aa)

This feature has no annotations

A3-16-all-fractions_k255_4416167_11

Not on your lists

7282..9693
DNA (2412bp) protein (804aa)
catalase (EC:1.11.1.6)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037BA897
Putative catalase {ECO:0000313|EMBL:ACF98209.1}; TaxID=548901 species="Bacteria; environmental samples.;" source="uncultured bacterium 1114.;"
A3-16-all-fractions_k255_4416167_12
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9760..9939
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X444_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF78391.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
A3-16-all-fractions_k255_4416167_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9955..10515
DNA (561bp) protein (187aa)
Inorganic diphosphatase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022W2_SOLUE
inorganic diphosphatase
Inorganic diphosphatase {ECO:0000313|EMBL:AIE86123.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
A3-16-all-fractions_k255_4416167_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10528..11154)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036055D1
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25210.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
isochorismatase hydrolase
A3-16-all-fractions_k255_4416167_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11283..12452
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V708_VARPE
alcohol dehydrogenase groes domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADU37212.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-16-all-fractions_k255_4416167_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..13285
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB5_9RHIZ
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIB14439.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
A3-16-all-fractions_k255_4416167_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..13912)
DNA (330bp) protein (110aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CN15_MYXFH
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX39443.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short-chain dehydrogenase/reductase SDR
A3-16-all-fractions_k255_4416167_18
unknown

Not on your lists

14153..14398
DNA (246bp) protein (82aa)

This feature has no annotations

A3-16-all-fractions_k255_4416167_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14502..15722
DNA (1221bp) protein (407aa)
Candidate UDP-galactopyranose mutase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVK6_RAMTT
glf; UDP-galactopyranose mutase
Candidate UDP-galactopyranose mutase {ECO:0000313|EMBL:AEG91582.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-16-all-fractions_k255_4416167_20
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15719..17779
DNA (2061bp) protein (687aa)
Candidate b-glycosidase, Glycoside Hydrolase Family 1 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVK5_RAMTT
b-glycosidase
Candidate b-glycosidase, Glycoside Hydrolase Family 1 {ECO:0000313|EMBL:AEG91581.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-16-all-fractions_k255_4416167_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17855..19708
DNA (1854bp) protein (618aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNM2_RUBGI
putative ABC transporter permease/ATP-binding protein
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAL94609.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_4416167_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19714..20946)
DNA (1233bp) protein (411aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y726_NITMU
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABB75445.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
A3-16-all-fractions_k255_4416167_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20954..21895)
DNA (942bp) protein (314aa)
Amidohydrolase 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y727_NITMU
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABB75444.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
A3-16-all-fractions_k255_4416167_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21909..23219)
DNA (1311bp) protein (437aa)
Glycosyl transferase group 1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7W8_VARPE
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADU37229.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-16-all-fractions_k255_4416167_25
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23524..25548
DNA (2025bp) protein (675aa)
Putative Histidine kinase {ECO:0000313|EMBL:CBN57406.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBN57406.1};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
Putative Histidine kinase n=2 Tax=Oscillatoria RepID=D8G466_9CYAN
PAS domain-containing protein
A3-16-all-fractions_k255_4416167_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25563..26036)
DNA (474bp) protein (158aa)
Putative histone H1-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJP9_CHIPD
histone H1-like protein
Putative histone H1-like protein {ECO:0000313|EMBL:ACU63809.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
A3-16-all-fractions_k255_4416167_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26131..29064)
DNA (2934bp) protein (978aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5M3_LEPCP
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACB34735.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_4416167_28
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29173..31158
DNA (1986bp) protein (662aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVV6_9BURK
5'-nucleotidase {ECO:0000313|EMBL:KGM40786.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
A3-16-all-fractions_k255_4416167_29
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31300..31752
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6K0_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF99301.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
A3-16-all-fractions_k255_4416167_30
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31759..32055)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003689B7A
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETY82030.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
TetR family transcriptional regulator
Displaying 30 items

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