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A3-16-all-fractions_k255_4615241

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_4615241_1
unknown

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2..91
DNA (90bp) protein (30aa)

This feature has no annotations

A3-16-all-fractions_k255_4615241_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(589..882)
DNA (294bp) protein (98aa)
Methyltransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y1I8_PARAH
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36203.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
methyltransferase
A3-16-all-fractions_k255_4615241_3
unknown

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927..1769
DNA (843bp) protein (281aa)

This feature has no annotations

A3-16-all-fractions_k255_4615241_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1971..2321
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLQ4_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96493.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_4615241_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2333..4603
DNA (2271bp) protein (757aa)
Putative xylitol oxidase {ECO:0000313|EMBL:EWS58446.1}; EC=1.1.3.41 {ECO:0000313|EMBL:EWS58446.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
FAD/FMN-containing dehydrogenases-like protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLQ3_METPP
FAD/FMN-containing dehydrogenases-like protein
A3-16-all-fractions_k255_4615241_6
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4681..5688
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLQ2_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS58445.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
A3-16-all-fractions_k255_4615241_7
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5780..6535
DNA (756bp) protein (252aa)
aldolase n=1 Tax=Variovorax paradoxus RepID=UPI0003659A77
putative aldolase, class 2
Tax=GWA2_Curvibacter_64_110_curated
A3-16-all-fractions_k255_4615241_8
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6728..7801
DNA (1074bp) protein (358aa)
Fimbrial protein pilin n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNN9_METS6
fimbrial protein pilin
Uncharacterized protein {ECO:0000313|EMBL:ADE11467.1}; Flags: Precursor;; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
A3-16-all-fractions_k255_4615241_9
unknown

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comp(7839..8393)
DNA (555bp) protein (185aa)

This feature has no annotations

A3-16-all-fractions_k255_4615241_10
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8605..12492
DNA (3888bp) protein (1296aa)
PAS sensor diguanylate cyclase and phosphodiesterase n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZF1_9BURK
PAS sensor diguanylate cyclase and phosphodiesterase {ECO:0000313|EMBL:EGF32026.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein
A3-16-all-fractions_k255_4615241_11
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12615..13229
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2I491_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EUC16036.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein
A3-16-all-fractions_k255_4615241_12
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13265..13567)
DNA (303bp) protein (101aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434, ECO:0000313|EMBL:CAJ94736.1};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Burkholderiaceae RepID=Q0K5I5_CUPNH
A3-16-all-fractions_k255_4615241_13
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13695..14645)
DNA (951bp) protein (317aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1R8_9NEIS
Transcriptional regulator {ECO:0000313|EMBL:KGM41433.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
LysR family transcriptional regulator
A3-16-all-fractions_k255_4615241_14
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14704..15981
DNA (1278bp) protein (426aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
diaminopimelate decarboxylase n=1 Tax=Leeia oryzae RepID=UPI0003807C5E
diaminopimelate decarboxylase
Displaying 14 items

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