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A3-16-all-fractions_k255_4640963

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_4640963_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..335
DNA (333bp) protein (111aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Fructose-bisphosphate aldolase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KA69_NITWC
A3-16-all-fractions_k255_4640963_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(332..634)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYJ9_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB36435.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_4640963_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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786..2237
DNA (1452bp) protein (484aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYJ8_LEPCP
transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ACB36434.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_4640963_4
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2257..3363)
DNA (1107bp) protein (369aa)
D-alanine--D-alanine ligase A {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase A {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase A {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003742F50
ddlA; D-alanine--D-alanine ligase
A3-16-all-fractions_k255_4640963_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3903..4805
DNA (903bp) protein (301aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUW9_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EHR69746.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
extracellular solute-binding protein
A3-16-all-fractions_k255_4640963_6
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5098..6141
DNA (1044bp) protein (348aa)
Putative porin n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUR5_9BURK
Putative porin {ECO:0000313|EMBL:EGF33656.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
gram-negative type outer membrane porin protein
A3-16-all-fractions_k255_4640963_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6181..6840)
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS63_PARL1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS62746.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
A3-16-all-fractions_k255_4640963_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7335..8117
DNA (783bp) protein (261aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPX0_RUBGI
A3-16-all-fractions_k255_4640963_9
unknown

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8234..8473
DNA (240bp) protein (80aa)

This feature has no annotations

A3-16-all-fractions_k255_4640963_10
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8484..9494)
DNA (1011bp) protein (337aa)
cation transporter n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036AB6E8
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EHR03931.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
cation-efflux pump
A3-16-all-fractions_k255_4640963_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9494..11545)
DNA (2052bp) protein (684aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQJ3_9GAMM
A3-16-all-fractions_k255_4640963_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11726..12451
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVU5_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39773.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
A3-16-all-fractions_k255_4640963_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12426..13517
DNA (1092bp) protein (364aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Transaldolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQJ6_9GAMM
transaldolase
A3-16-all-fractions_k255_4640963_14
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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13529..14203
DNA (675bp) protein (225aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QNI4_9CYAN
A3-16-all-fractions_k255_4640963_15
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14543..14977)
DNA (435bp) protein (145aa)
Transcriptional regulator, TetR family n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R2R4_STRVP
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCA58189.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
Displaying 15 items

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