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A3-16-all-fractions_k255_5626424

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5626424_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..112
DNA (111bp) protein (37aa)
putative phage DNA polymerase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=12494309 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phage DNA polymerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
A3-16-all-fractions_k255_5626424_2
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(509..1897)
DNA (1389bp) protein (463aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=GLMU_METPP
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-16-all-fractions_k255_5626424_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1950..2648)
DNA (699bp) protein (233aa)
Putative lipoprotein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLE0_RUBGI
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:BAL93827.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_5626424_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2939..3883)
DNA (945bp) protein (315aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKR2_9BURK
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative TtcA family protein
A3-16-all-fractions_k255_5626424_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3880..4278)
DNA (399bp) protein (133aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
diguanylate cyclase n=1 Tax=Caldimonas manganoxidans RepID=UPI000372C7FE
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_5626424_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4275..5138)
DNA (864bp) protein (288aa)
short-chain dehydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B935E
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB32378.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_5626424_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5159..6400
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKQ9_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73063.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-16-all-fractions_k255_5626424_8
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6400..6591
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003466046
hypothetical protein
Tax=CG_Rhodof_01
A3-16-all-fractions_k255_5626424_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6584..6913)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002896645
Uncharacterized protein {ECO:0000313|EMBL:EZP35788.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
A3-16-all-fractions_k255_5626424_10
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..7725)
DNA (546bp) protein (182aa)
Isochorismatase n=2 Tax=Serratia plymuthica RepID=S4YDU0_SERPL
isochorismatase
Isochorismatase {ECO:0000313|EMBL:AGP43612.1}; TaxID=1348660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica S13.;"
A3-16-all-fractions_k255_5626424_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8969)
DNA (1248bp) protein (416aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.72)
Multifunctional CCA protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV40_9BURK
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-16-all-fractions_k255_5626424_12
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8966..11194)
DNA (2229bp) protein (743aa)
transglycosylase (EC:3.2.1.-)
lytic transglycosylase, partial n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B56B77
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:KDB53060.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
A3-16-all-fractions_k255_5626424_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..11950)
DNA (687bp) protein (229aa)
glutathione S-transferase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E5E62B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_5626424_14
unknown

Not on your lists

12311..12859
DNA (549bp) protein (183aa)

This feature has no annotations

A3-16-all-fractions_k255_5626424_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12957..13862
DNA (906bp) protein (302aa)
Cation diffusion facilitator family transporter n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH84_9BURK
putative cation transmembrane transporter
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_5626424_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13874..14317
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH85_9BURK
A3-16-all-fractions_k255_5626424_17
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..14694
DNA (369bp) protein (123aa)
cupin n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003494597
cupin superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-16-all-fractions_k255_5626424_18
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14691..14990)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037C4B5B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96095.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_5626424_19
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15146..18577
DNA (3432bp) protein (1144aa)
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHR2_CELJU
ATPase
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein protein {ECO:0000313|EMBL:ACE85108.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
A3-16-all-fractions_k255_5626424_20
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18726..20642
DNA (1917bp) protein (639aa)
Hipothetical sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHR1_CELJU
sensory box/GGDEF family protein
Hipothetical sensory box/GGDEF family protein {ECO:0000313|EMBL:ACE85405.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
A3-16-all-fractions_k255_5626424_21
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20650..21558)
DNA (909bp) protein (303aa)
5-nucleotidase, putative n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKK5_METPP
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:EWS61805.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-16-all-fractions_k255_5626424_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..23053)
DNA (1230bp) protein (410aa)
ATPase AAA n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B33F9A
ATPase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_5626424_23
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23206..23844
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000367EE53
RNA polymerase sigma-e factor sigma-24
Tax=GWA2_Burkholderiales_64_37_curated
A3-16-all-fractions_k255_5626424_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23841..24506
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036EAC7B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_5626424_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24833..25942)
DNA (1110bp) protein (370aa)
Chitinase ChiI {ECO:0000313|EMBL:EZP41014.1}; EC=3.2.1.14 {ECO:0000313|EMBL:EZP41014.1};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036F78D6
chiA; chiA
Displaying 25 items

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