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A3-16-all-fractions_k255_5830575

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5830575_1
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..448)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI00036F0018
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
A3-16-all-fractions_k255_5830575_2
unknown

Not on your lists

comp(487..729)
DNA (243bp) protein (81aa)

This feature has no annotations

A3-16-all-fractions_k255_5830575_3
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(824..1924)
DNA (1101bp) protein (367aa)
Fatty acid desaturase {ECO:0000313|EMBL:EWS53991.1}; EC=1.14.19.- {ECO:0000313|EMBL:EWS53991.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Putative fatty acid desaturase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLW0_METPP
fatty acid desaturase
A3-16-all-fractions_k255_5830575_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2383..3051)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034AD25E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96523.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_5830575_5
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3051..4469)
DNA (1419bp) protein (473aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Coproporphyrinogen-III oxidase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIN6_METPP
A3-16-all-fractions_k255_5830575_6
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..4750)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X41_RHOFD
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69662.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-16-all-fractions_k255_5830575_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4788..5054)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90904.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
A3-16-all-fractions_k255_5830575_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..6526)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000380D8C7
cytochrome c oxidase accessory protein CcoG
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:ACB35040.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-16-all-fractions_k255_5830575_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..7440)
DNA (906bp) protein (302aa)
ccoP; Cbb3-type cytochrome oxidase subunit 3 CcoP (EC:1.9.3.1)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU42_RUBGI
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_5830575_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7437..7586)
DNA (150bp) protein (50aa)
Cbb3-type cytochrome oxidase component id=1266362 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Cbb3-type cytochrome oxidase, subunit 3
Tax=BJP_08E140C01_Burkholderiales_65_30
A3-16-all-fractions_k255_5830575_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7596..8228)
DNA (633bp) protein (211aa)
ccoO; Cbb3-type cytochrome oxidase subunit 2 CcoO (EC:1.9.3.1)
Cbb3-type cytochrome oxidase subunit 2 CcoO n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU44_RUBGI
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
A3-16-all-fractions_k255_5830575_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8250..9695)
DNA (1446bp) protein (482aa)
cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1)
Putative cytochrome C oxidase (Subunit I) transmembrane protein {ECO:0000313|EMBL:ABM95433.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABM95433.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Putative cytochrome C oxidase (Subunit I) transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIP4_METPP
A3-16-all-fractions_k255_5830575_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..9924)
DNA (189bp) protein (63aa)
cytochrome oxidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B69890
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EHR72311.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ccoS; cytochrome oxidase maturation protein, cbb3-type CcoS
A3-16-all-fractions_k255_5830575_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9929..12073)
DNA (2145bp) protein (715aa)
copper-translocating P-type ATPase:heavy metal translocating P-type ATPase CtpA (EC:3.6.3.4)
Putative cation transport P-type ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQV2_9BURK
Putative cation transport P-type ATPase {ECO:0000313|EMBL:EGJ10720.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-16-all-fractions_k255_5830575_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12085..12834)
DNA (750bp) protein (250aa)
CRP/FNR family transcriptional regulator, anaerobic regulatory protein FnrL n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU38_RUBGI
fnrL; CRP/FNR family transcriptional regulator, anaerobic regulatory protein FnrL
CRP/FNR family transcriptional regulator, anaerobic regulatory protein FnrL {ECO:0000313|EMBL:BAL96525.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_5830575_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12901..13494)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TNU0_9BURK
hemerythrin HHE cation binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EJL80397.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
A3-16-all-fractions_k255_5830575_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13507..13821)
DNA (315bp) protein (105aa)
High-potential iron-sulfur protein n=2 Tax=Rubrivivax gelatinosus RepID=I0HRS2_RUBGI
hip; high potential iron-sulfur protein, HiPIP
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; TaxID=28068 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (Rhodocyclus gelatinosus) (Rhodopseudomonas; gelatinosa).;"
A3-16-all-fractions_k255_5830575_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14007..14855
DNA (849bp) protein (283aa)
universal stress protein UspA n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003807F8A
Universal stress protein {ECO:0000313|EMBL:KIF80093.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
A3-16-all-fractions_k255_5830575_19
unknown

Not on your lists

comp(14895..15383)
DNA (489bp) protein (163aa)

This feature has no annotations

A3-16-all-fractions_k255_5830575_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15600..16400
DNA (801bp) protein (267aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Variovorax paradoxus B4 RepID=T1XJZ7_VARPD
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGU52908.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-16-all-fractions_k255_5830575_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16405..18480)
DNA (2076bp) protein (692aa)
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00037EF282
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACS22172.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-16-all-fractions_k255_5830575_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18487..19230)
DNA (744bp) protein (248aa)
chemotaxis protein CheY n=1 Tax=Variovorax paradoxus RepID=UPI00037B3415
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACS22171.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-16-all-fractions_k255_5830575_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19425..20789
DNA (1365bp) protein (455aa)
Beta-lactamase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ18_9BURK
putative ribonuclease, metallo-beta-lactamase superfamily
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
A3-16-all-fractions_k255_5830575_24
Vibrio sp. JCM 19241, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20886..21137
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000362E450
Uncharacterized protein {ECO:0000313|EMBL:GAM74614.1}; TaxID=1481919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. JCM 19241.;"
hypothetical protein
A3-16-all-fractions_k255_5830575_25
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21047..21268)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036D0B3C
PAS/PAC and GAF sensor-containing diguanylate cyclase
Tax=BJP_IG2103_Dechloromonas_60_92
Displaying 25 items

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