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A3-16-all-fractions_k255_5832684

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5832684_1
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=RUVC_POLSJ
ruvC; Holliday junction resolvase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-16-all-fractions_k255_5832684_2
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(222..1199)
DNA (978bp) protein (326aa)
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SD06_METPP
CDP-diglyceride synthase {ECO:0000313|EMBL:EWS58893.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-16-all-fractions_k255_5832684_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1196..1822)
DNA (627bp) protein (209aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJB6_9BURK
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EHR70071.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative acyltransferase
A3-16-all-fractions_k255_5832684_4
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1876..2949
DNA (1074bp) protein (358aa)
Sensor protein LytS {ECO:0000313|EMBL:ELX09342.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ELX09342.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003616F38
hypothetical protein
A3-16-all-fractions_k255_5832684_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2946..3692
DNA (747bp) protein (249aa)
Positive alginate biosynthesis regulatory protein, putative n=1 Tax=Ricinus communis RepID=B9TLS0_RICCO
Putative response regulator {ECO:0000313|EMBL:KFC76496.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Positive alginate biosynthesis regulatory protein
A3-16-all-fractions_k255_5832684_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3796..4977
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEG9_9BURK
Acetyltransferase {ECO:0000313|EMBL:KGM56195.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
acetyltransferase
A3-16-all-fractions_k255_5832684_7

Not on your lists

comp(4986..6131)
DNA (1146bp) protein (382aa)
Periplasmic binding protein n=1 Tax=uncultured organism RepID=T1WA00_9ZZZZ
Periplasmic binding protein {ECO:0000313|EMBL:AGU11476.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
extracellular ligand-binding receptor
A3-16-all-fractions_k255_5832684_8
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6128..7381)
DNA (1254bp) protein (418aa)
major facilitator transporter n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237501B
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AIW15669.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
A3-16-all-fractions_k255_5832684_9
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(7390..9303)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034B8CED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ00608.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
A3-16-all-fractions_k255_5832684_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9378..10508)
DNA (1131bp) protein (377aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJ98_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EHR70052.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
extracellular ligand-binding receptor
A3-16-all-fractions_k255_5832684_11
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10649..11413)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003646216
Outer membrane protein V {ECO:0000313|EMBL:KEQ52081.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
MltA-interacting MipA
A3-16-all-fractions_k255_5832684_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11413..12048)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037552D8
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ELX12275.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
narP; nitrate/nitrite response regulator protein
A3-16-all-fractions_k255_5832684_13
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..13292)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035CCD8E
Signal transduction histidine kinase {ECO:0000313|EMBL:ELX12274.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
histidine kinase
A3-16-all-fractions_k255_5832684_14
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13468..14232
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PN24_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX12273.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
A3-16-all-fractions_k255_5832684_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14328..15881
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKY6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX12272.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
A3-16-all-fractions_k255_5832684_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16028..17602)
DNA (1575bp) protein (525aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNV6_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 16 items

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