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A3-16-all-fractions_k255_5997526

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5997526_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSE5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH19646.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ErfK/YbiS/YcfS/YnhG family protein
A3-16-all-fractions_k255_5997526_2
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

525..857
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KJK58942.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
A3-16-all-fractions_k255_5997526_3
unknown

Not on your lists

950..1288
DNA (339bp) protein (113aa)

This feature has no annotations

A3-16-all-fractions_k255_5997526_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1326..2375
DNA (1050bp) protein (350aa)
RNA polymerase sigma-70 factor, TIGR02960 family n=1 Tax=Acidovorax sp. CF316 RepID=J0UF89_9BURK
RNA polymerase sigma-70 factor, TIGR02960 family {ECO:0000313|EMBL:EJE54822.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RNA polymerase subunit sigma-24
A3-16-all-fractions_k255_5997526_5
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2469..3056
DNA (588bp) protein (196aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLW0_SIDLE
bifunctional deaminase-reductase domain protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADE12555.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
A3-16-all-fractions_k255_5997526_6
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..4126)
DNA (1032bp) protein (344aa)
Isocitrate dehydrogenase [NADP] {ECO:0000313|EMBL:EWS64776.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EWS64776.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD+) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VV6_RHOFD
A3-16-all-fractions_k255_5997526_7
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4179..5285)
DNA (1107bp) protein (369aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TV94_ACIAC
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABM34882.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
A3-16-all-fractions_k255_5997526_8
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5444..7585)
DNA (2142bp) protein (714aa)
beta-glucuronidase (EC:3.2.1.31)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003685839
Uncharacterized protein {ECO:0000313|EMBL:ESQ89383.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
A3-16-all-fractions_k255_5997526_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7733..9247)
DNA (1515bp) protein (505aa)
Alpha-N-arabinofuranosidase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HZ11_9ACTO
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:ETK32878.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alpha-N-arabinofuranosidase
A3-16-all-fractions_k255_5997526_10
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10066..10731
DNA (666bp) protein (222aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRZ9_SIDLE
Crp/Fnr family transcriptional regulator
Tax=GWA2_Gallionellales_60_142_curated
A3-16-all-fractions_k255_5997526_11
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10835..11491
DNA (657bp) protein (219aa)
peroxidase (EC:1.11.1.7)
Peroxidase {ECO:0000313|EMBL:ADG18889.1}; EC=1.11.1.7 {ECO:0000313|EMBL:ADG18889.1};; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
peroxidase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003728A1C
A3-16-all-fractions_k255_5997526_12
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11516..12604
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000302AAB5
Beta-lactamase {ECO:0000313|EMBL:KGM40177.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
Zn-dependent hydrolase
A3-16-all-fractions_k255_5997526_13
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12828..13613
DNA (786bp) protein (262aa)
transposase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003788282
Transposase {ECO:0000313|EMBL:CCA84692.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
transposase DDE domain protein
A3-16-all-fractions_k255_5997526_14
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13667..14275
DNA (609bp) protein (203aa)
Transposase, IS4 family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NI7_CUPPJ
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:AAZ65277.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
A3-16-all-fractions_k255_5997526_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14544..15035)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LJZ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL85538.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
A3-16-all-fractions_k255_5997526_16
unknown

Not on your lists

comp(15076..15282)
DNA (207bp) protein (69aa)

This feature has no annotations

A3-16-all-fractions_k255_5997526_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15560..16792)
DNA (1233bp) protein (411aa)
Citrate synthase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AS80_DELSC
Citrate synthase
Citrate synthase {ECO:0000313|EMBL:AEF88963.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
A3-16-all-fractions_k255_5997526_18
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16889..18301
DNA (1413bp) protein (471aa)
CoA-transferase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6I8_9BURK
CoA-transferase family III protein {ECO:0000313|EMBL:KCB44813.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
A3-16-all-fractions_k255_5997526_19
unknown

Not on your lists

18656..19303
DNA (648bp) protein (216aa)

This feature has no annotations

A3-16-all-fractions_k255_5997526_20
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19473..20264)
DNA (792bp) protein (264aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN7_PARL1
glutathione S-transferase domain-containing protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
A3-16-all-fractions_k255_5997526_21
unknown

Not on your lists

21191..21685
DNA (495bp) protein (165aa)

This feature has no annotations

A3-16-all-fractions_k255_5997526_22
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21798..23792)
DNA (1995bp) protein (665aa)
TonB-dependent receptor n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PMD2_9BURK
TonB-dependent receptor {ECO:0000313|EMBL:ELX12752.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
tonB-dependent Receptor Plug domain protein
A3-16-all-fractions_k255_5997526_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24441..27692
DNA (3252bp) protein (1084aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFD0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41603.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
A3-16-all-fractions_k255_5997526_24
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27689..30349
DNA (2661bp) protein (887aa)
Non-ribosomal peptide synthetase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JSX5_SACES
nrps5-1; Non-ribosomal peptide synthetase
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:CCH30860.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
A3-16-all-fractions_k255_5997526_25
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30346..31668
DNA (1323bp) protein (441aa)
Arabinose efflux permease family protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QQ81_NOSS7
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFY47244.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
A3-16-all-fractions_k255_5997526_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31716..34787
DNA (3072bp) protein (1024aa)
Amino acid adenylation domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTI9_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41603.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
A3-16-all-fractions_k255_5997526_27
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35022..36698
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036016B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42121.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
A3-16-all-fractions_k255_5997526_28
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36695..37321
DNA (627bp) protein (209aa)
ribA; GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
GTP cyclohydrolase n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035FDD34
A3-16-all-fractions_k255_5997526_29
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37318..37986
DNA (669bp) protein (223aa)
Methyltransferase small n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I840_9PSEU
Methyltransferase small {ECO:0000313|EMBL:EOD66574.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
methyltransferase small
A3-16-all-fractions_k255_5997526_30
unknown

Not on your lists

38039..38854
DNA (816bp) protein (272aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy