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A3-16-all-fractions_k255_6035262

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_6035262_1

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2..247
DNA (246bp) protein (82aa)
Isocitrate lyase {ECO:0000313|EMBL:CBH97914.1}; EC=4.1.3.1 {ECO:0000313|EMBL:CBH97914.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
isocitrate lyase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003819309
isocitrate lyase
A3-16-all-fractions_k255_6035262_2
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(338..1465)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U3_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
A3-16-all-fractions_k255_6035262_3
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1462..2379)
DNA (918bp) protein (306aa)
Hpr(Ser) kinase/phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U4_RHOFD
HPr kinase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2376..2663)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL59_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93746.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_6035262_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2683..3336)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR09_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10777.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
twin-arginine translocation pathway signal protein
A3-16-all-fractions_k255_6035262_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..4779)
DNA (1395bp) protein (465aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNN7_9BURK
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EHR72011.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-16-all-fractions_k255_6035262_7
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5140..7242
DNA (2103bp) protein (701aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U9_RHOFD
periplasmic sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7239..8606
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U8_RHOFD
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_9
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8650..11409
DNA (2760bp) protein (920aa)
Tetratricopeptide TPR_2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U7_RHOFD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_10
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11387..11905)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZFG4_9RHOO
protein tyrosine phosphatase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11953..12636)
DNA (684bp) protein (228aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000313|EMBL:KFC66136.1}; EC=2.1.1.163 {ECO:0000313|EMBL:KFC66136.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036EBB74
type 11 methyltransferase
A3-16-all-fractions_k255_6035262_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12921..13736
DNA (816bp) protein (272aa)
hypothetical protein id=12493046 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PEP-CTERM motif-containing protein {ECO:0000313|EMBL:KFC66135.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
A3-16-all-fractions_k255_6035262_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13876..14739
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN18_9BURK
moeB; molybdopterin biosynthesis protein
Tax=CG_Rhodof_02
A3-16-all-fractions_k255_6035262_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15001..15633
DNA (633bp) protein (211aa)
Putative polysaccharide export protein, PEP-CTERM sytem-associated n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM6_9BURK
Putative polysaccharide export protein, PEP-CTERM sytem-associated {ECO:0000313|EMBL:EHR72009.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
polysaccharide export protein
A3-16-all-fractions_k255_6035262_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15726..17315
DNA (1590bp) protein (530aa)
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM5_9BURK
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily {ECO:0000313|EMBL:EHR72008.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
lipopolysaccharide biosynthesis
A3-16-all-fractions_k255_6035262_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17317..18246
DNA (930bp) protein (310aa)
Non-specific protein-tyrosine kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN15_9BURK
Non-specific protein-tyrosine kinase {ECO:0000313|EMBL:EGJ09733.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
protein-tyrosine kinase
A3-16-all-fractions_k255_6035262_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18246..19817
DNA (1572bp) protein (524aa)
Uncharacterized protein, PEP-CTERM system associated n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM3_9BURK
Uncharacterized protein, PEP-CTERM system associated {ECO:0000313|EMBL:EHR72006.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-16-all-fractions_k255_6035262_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19821..20939
DNA (1119bp) protein (373aa)
ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN13_9BURK
putative nucleoside-triphosphatase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_6035262_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20936..22099
DNA (1164bp) protein (388aa)
wecB; UDP-N-acetylglucosamine 2-epimerase WecB (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase WecB {ECO:0000313|EMBL:BAL93758.1}; EC=5.1.3.14 {ECO:0000313|EMBL:BAL93758.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
UDP-N-acetylglucosamine 2-epimerase WecB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL71_RUBGI
A3-16-all-fractions_k255_6035262_20
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22110..22976
DNA (867bp) protein (289aa)
Polysaccharide deacetylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y8_RHOFD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABD68415.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-16-all-fractions_k255_6035262_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22976..24022
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y7_RHOFD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-16-all-fractions_k255_6035262_22
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24019..25620
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y6_RHOFD
hypothetical protein
Tax=CG_Rhodof_03
A3-16-all-fractions_k255_6035262_23
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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25617..27236
DNA (1620bp) protein (540aa)
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:EXI68196.1}; EC=2.1.2.9 {ECO:0000313|EMBL:EXI68196.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Polysaccharide deacetylase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT01_ACCPU
polysaccharide deacetylase
A3-16-all-fractions_k255_6035262_24
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27313..28458
DNA (1146bp) protein (382aa)
Putative glycosyltransferase EpsF {ECO:0000313|EMBL:EXI76745.1}; EC=2.4.-.- {ECO:0000313|EMBL:EXI76745.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT02_ACCPU
sugar transferase
A3-16-all-fractions_k255_6035262_25
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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28473..30419
DNA (1947bp) protein (649aa)
Asparagine synthetase [glutamine-hydrolyzing] 1 {ECO:0000313|EMBL:EXI77234.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EXI77234.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
exosortase 1 system-associated amidotransferase 1 (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNL6_9BURK
A3-16-all-fractions_k255_6035262_26
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30416..31633
DNA (1218bp) protein (406aa)
Spore coat protein SA {ECO:0000313|EMBL:EXI88315.1}; EC=2.4.-.- {ECO:0000313|EMBL:EXI88315.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Glycosyl transferase, group 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y2_RHOFD
group 1 glycosyl transferase
A3-16-all-fractions_k255_6035262_27
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31642..33567
DNA (1926bp) protein (642aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT05_ACCPU
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
A3-16-all-fractions_k255_6035262_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33564..34793
DNA (1230bp) protein (410aa)
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT06_ACCPU
sugar transferase
Sugar transferase, PEP-CTERM/EpsH1 system associated {ECO:0000313|EMBL:ACV34749.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
A3-16-all-fractions_k255_6035262_29
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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34790..36106
DNA (1317bp) protein (439aa)
GDP-mannose 6-dehydrogenase (EC:1.1.1.132)
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:ABD68424.1}; EC=1.1.1.132 {ECO:0000313|EMBL:ABD68424.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
GDP-mannose 6-dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220X9_RHOFD
A3-16-all-fractions_k255_6035262_30
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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36137..37345
DNA (1209bp) protein (403aa)
glycosyltransferase 1 protein (EC:2.4.1.40)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000366EE1D
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIK92588.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying items 1-30 of 33 in total

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