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A3-16-all-fractions_k255_6494388

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_6494388_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..496
DNA (495bp) protein (165aa)
Short chain dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSG3_9BURK
Short chain dehydrogenase {ECO:0000313|EMBL:EGJ11281.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
short chain dehydrogenase
A3-16-all-fractions_k255_6494388_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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501..926
DNA (426bp) protein (142aa)
thioesterase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D1CE4
thioesterase superfamily protein
Tax=GWA2_Burkholderiales_64_37_curated
A3-16-all-fractions_k255_6494388_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(965..1579)
DNA (615bp) protein (205aa)
LuxR family transcriptional regulator n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034807B4
LuxR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_6494388_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1576..1983)
DNA (408bp) protein (136aa)
Phenylacetic acid degradation protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JEU0_9BURK
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_6494388_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2095..2799
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN91_9BURK
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EHR71131.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-16-all-fractions_k255_6494388_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2924..3562
DNA (639bp) protein (213aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN92_9BURK
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EHR71132.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-16-all-fractions_k255_6494388_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3599..3856)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLZ2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09360.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-16-all-fractions_k255_6494388_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3924..4115)
DNA (192bp) protein (64aa)
Cold-shock DNA-binding protein family protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLZ1_9BURK
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:EGJ09359.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cold shock protein
A3-16-all-fractions_k255_6494388_9
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4347..5384)
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=PYRD_LEPCP
A3-16-all-fractions_k255_6494388_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5522..6184
DNA (663bp) protein (221aa)
rpiA; ribose-5-phosphate isomerase A RpiA (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C4F9D
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_6494388_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6099..7451)
DNA (1353bp) protein (451aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHD1_ACIET
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACM32836.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
A3-16-all-fractions_k255_6494388_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7463..8353
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3D9V8_9BURK
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM94008.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_6494388_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8354..10381)
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000382A1DF
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-16-all-fractions_k255_6494388_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10566..11117)
DNA (552bp) protein (184aa)
Elongation factor P n=2 Tax=Rubrivivax RepID=I0HPM4_RUBGI
efp; elongation factor P Efp
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Displaying 14 items

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