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A3-16-all-fractions_k255_5753564

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5753564_1
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2..496)
DNA (495bp) protein (165aa)
id=3550202 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_5753564_2
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(517..1386)
DNA (870bp) protein (290aa)
UTP-glucose-1-phosphate uridylyltransferase id=3193126 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
UTP-glucose-1-phosphate uridylyltransferase
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_5753564_3
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1409..1792)
DNA (384bp) protein (128aa)
Transcriptional regulator, TraR/DksA family id=3193124 bin=GWA1_Deltaproteobacteria_52_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
TraR/DksA family transcriptional regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_4
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1850..2698
DNA (849bp) protein (283aa)
id=3193122 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_5753564_5
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2957..4267)
DNA (1311bp) protein (437aa)
aminopeptidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028895EC
Aminopeptidase {ECO:0000313|EMBL:KHM96882.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
aminopeptidase N
A3-16-all-fractions_k255_5753564_6
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4305..5111)
DNA (807bp) protein (269aa)
yfmF; ABC-type cobalamin/Fe3+-siderophores transpor t system, ATPase component YfmF (EC:3.6.3.34)
ABC transporter related protein id=3193117 bin=GWA1_Deltaproteobacteria_52_35 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_7
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5108..6067)
DNA (960bp) protein (320aa)
ABC transport system, permease component id=3193113 bin=GWA1_Deltaproteobacteria_52_35 species=Corynebacterium urealyticum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
fecD; Fe+3/siderophore ABC transporter permease
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(6057..6962)
DNA (906bp) protein (302aa)
Periplasmic binding protein id=3445449 bin=GWB1_Deltaproteobacteria_rel_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
periplasmic binding protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_5753564_9
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(6943..7587)
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase id=3445553 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
membrane protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_10
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7587..8390)
DNA (804bp) protein (268aa)
lgt; prolipoprotein diacylglycyeryl transferase Lgt (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase id=3193107 bin=GWA1_Deltaproteobacteria_52_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A3-16-all-fractions_k255_5753564_11
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8372..8944)
DNA (573bp) protein (191aa)
id=3193103 bin=GWA1_Deltaproteobacteria_52_35 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_5753564_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8932..9381)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6S7_9BACT
putative GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:AIE87198.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
A3-16-all-fractions_k255_5753564_13
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

9549..10244
DNA (696bp) protein (232aa)
Uncharacterized protein id=3193099 bin=GWA1_Deltaproteobacteria_52_35 species=Phytophthora ramorum genus=Phytophthora taxon_order=Peronosporales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_14
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10228..12132)
DNA (1905bp) protein (635aa)
ATP-dependent zinc metalloprotease FtsH id=3193096 bin=GWA1_Deltaproteobacteria_52_35 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
ftsH-2; cell division protein FtsH
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_5753564_15
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12211..12510)
DNA (300bp) protein (100aa)
Protoporphyrinogen oxidase id=3859803 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_5753564_16
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12517..13563)
DNA (1047bp) protein (349aa)
Protoporphyrinogen oxidase id=3859803 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protoporphyrinogen oxidase
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_5753564_17
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13578..14948)
DNA (1371bp) protein (457aa)
Oxygen-independent coproporphyrinogen III oxidase id=3859805 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
oxygen-independent coproporphyrinogen III oxidase
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_5753564_18
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(14945..15670)
DNA (726bp) protein (242aa)
Uroporphyrinogen decarboxylase id=3859807 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hemE; uroporphyrinogen decarboxylase
Tax=GWB1_Bdellovibrionales_55_8_curated
Displaying 18 items

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