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A3-16-all-fractions_k255_6137972

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_6137972_1
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(1..342)
DNA (342bp) protein (114aa)
id=2552364 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_6137972_2
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(291..1442)
DNA (1152bp) protein (384aa)
L-lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine 2,3-aminomutase YodO family protein id=3752299 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_6137972_3
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1636..2295
DNA (660bp) protein (220aa)
MotA/TolQ/ExbB proton channel id=3752297 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_6137972_4
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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2345..2824
DNA (480bp) protein (160aa)
Biopolymer transport protein ExbD/TolR id=3752295 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ExbD/TolR family transport energizing protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_6137972_5
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2733..3440)
DNA (708bp) protein (236aa)
id=2953163 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_6137972_6
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3468..4553
DNA (1086bp) protein (362aa)
Ubiquinone/menaquinone biosynthesis protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MKN8_BDEBA
ubiquinone/menaquinone biosynthesis protein
Ubiquinone/menaquinone biosynthesis protein {ECO:0000313|EMBL:CAE80169.1}; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
A3-16-all-fractions_k255_6137972_7
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4565..4924)
DNA (360bp) protein (120aa)
Response regulator id=2871083 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
chemotaxis protein CheY
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_6137972_8
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5402..5791)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DD2992
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK69797.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
Displaying 8 items

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