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A3-16-all-fractions_k255_7512555

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7512555_1
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1..300
DNA (300bp) protein (100aa)
DNA polymerase III delta prime subunit id=4001176 bin=GWB1_Deltaproteobacteria_rel_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_7512555_2
unknown

Not on your lists

421..954
DNA (534bp) protein (178aa)

This feature has no annotations

A3-16-all-fractions_k255_7512555_3
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

983..1351
DNA (369bp) protein (123aa)
Rhodanese domain protein id=3659571 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_7512555_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1348..2199)
DNA (852bp) protein (284aa)
Methyltransferase small n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMY3_9BACT
Methyltransferase small {ECO:0000313|EMBL:EEF58779.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
A3-16-all-fractions_k255_7512555_5
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..3230)
DNA (1041bp) protein (347aa)
ABC-2 type transporter n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNP7_SIDLE
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
A3-16-all-fractions_k255_7512555_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3236..4207)
DNA (972bp) protein (324aa)
ABC transporter ATP-binding protein n=1 Tax=Thiothrix disciformis RepID=UPI00035D423F
ABC transporter related protein {ECO:0000313|EMBL:EIJ34372.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ABC transporter
A3-16-all-fractions_k255_7512555_7
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

4284..6113
DNA (1830bp) protein (610aa)
Putative uncharacterized protein id=2908138 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_7512555_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

6143..8116
DNA (1974bp) protein (658aa)
ABC transporter ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-)
Putative ABC transporter, ATP-binding protein with duplicated ATPase domains id=3182153 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_7512555_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

8113..8331
DNA (219bp) protein (73aa)
id=3761796 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_7512555_10
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8328..8891)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MNY7_BDEBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE79012.1}; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
A3-16-all-fractions_k255_7512555_11
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8987..9886)
DNA (900bp) protein (300aa)
THIF family protein id=3316925 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
THIF family protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_7512555_12
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9900..10784)
DNA (885bp) protein (295aa)
TatD family hydrolase (EC:3.1.21.-)
Hydrolase, TatD family n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MKN3_BDEBA
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_7512555_13
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10766..12871)
DNA (2106bp) protein (702aa)
Queuine tRNA-ribosyltransferase id=3268918 bin=GWA1_Deltaproteobacteria_52_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
queuine tRNA-ribosyltransferase
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_7512555_14
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12995..13435)
DNA (441bp) protein (147aa)
Putative uncharacterized protein id=2487094 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_7512555_15
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13663..14622
DNA (960bp) protein (320aa)
Auxin Efflux Carrier id=2881114 bin=GWA1_Deltaproteobacteria_52_35 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
transporter
Tax=GWA1_Bdellovibrionales_52_35_curated
Displaying 15 items

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