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A3-18-all-fractions_k255_1072728

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_1072728_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(231..566)
DNA (336bp) protein (112aa)
Sulfur oxidation protein SoxZ n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DX04_SULAA
sulfur oxidation protein SoxZ
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
A3-18-all-fractions_k255_1072728_2
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(566..1051)
DNA (486bp) protein (162aa)
Sulfur oxidation protein SoxY n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HEN3_9PROT
sulfur oxidation protein SoxY
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
A3-18-all-fractions_k255_1072728_3
unknown

Not on your lists

comp(1098..1478)
DNA (381bp) protein (127aa)

This feature has no annotations

A3-18-all-fractions_k255_1072728_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1468..3699)
DNA (2232bp) protein (744aa)
Secreted metalloprotease n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CRI1_SHEPW
secreted metalloprotease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1072728_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3909..5114
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00037D49C5
aminotransferase class I and II
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1072728_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5111..6247
DNA (1137bp) protein (379aa)
Uncharacterized protein id=4674739 bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1072728_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6256..7215
DNA (960bp) protein (320aa)
NAD-dependent epimerase/dehydratase id=4674741 bin=GWA2_Ignavibacteriae_55_25 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1072728_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7188..8078
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDD0_DEFDS
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1072728_9
unknown

Not on your lists

comp(8006..8179)
DNA (174bp) protein (58aa)

This feature has no annotations

A3-18-all-fractions_k255_1072728_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8194..8721)
DNA (528bp) protein (176aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG88813.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
A3-18-all-fractions_k255_1072728_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9006..9650
DNA (645bp) protein (215aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1072728_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9743..10258
DNA (516bp) protein (172aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1072728_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10242..11237
DNA (996bp) protein (332aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
A3-18-all-fractions_k255_1072728_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11315..12682)
DNA (1368bp) protein (456aa)
hypothetical membrane protein id=24582159 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1072728_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12679..13383)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0T4_ROSS1
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1072728_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13370..13897)
DNA (528bp) protein (176aa)
hypothetical membrane protein id=14626219 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
Protein of unknown function DUF3341
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1072728_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13897..15264)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1072728_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(15267..18266)
DNA (3000bp) protein (1000aa)
mopA; protein MopA (EC:1.2.7.-); K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14426357 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
molybdopterin dinucleotide-binding region
Tax=CSP1_2_Dadabacteria
A3-18-all-fractions_k255_1072728_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18310..18903)
DNA (594bp) protein (198aa)
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1072728_20
unknown

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comp(19014..19544)
DNA (531bp) protein (177aa)

This feature has no annotations

A3-18-all-fractions_k255_1072728_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19544..20392)
DNA (849bp) protein (283aa)
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
putative methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1072728_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20392..21927)
DNA (1536bp) protein (512aa)
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AHG91280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
pilus retraction protein PilT; K02669 twitching motility protein PilT id=7200260 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
A3-18-all-fractions_k255_1072728_23
unknown

Not on your lists

comp(21937..22398)
DNA (462bp) protein (154aa)

This feature has no annotations

A3-18-all-fractions_k255_1072728_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22465..23262)
DNA (798bp) protein (266aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:BAH39744.1}; EC=1.1.1.31 {ECO:0000313|EMBL:BAH39744.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
Displaying 24 items

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