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A3-18-all-fractions_k255_1991490

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_1991490_1
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

2..787
DNA (786bp) protein (262aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
peptidase S9B dipeptidylpeptidase IV subunit
Tax=RBG_13_Chloroflexi_50_21_curated
A3-18-all-fractions_k255_1991490_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1262..2668)
DNA (1407bp) protein (469aa)
GGDEF domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUD4_9PROT
diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_3
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2668..3603)
DNA (936bp) protein (312aa)
Mg2 transporter protein CorA family protein id=4094412 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Mg2 transporter protein CorA family protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-18-all-fractions_k255_1991490_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3600..4355)
DNA (756bp) protein (252aa)
NCAIR mutase (PurE)-related proteins n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXL1_9BACT
NCAIR mutase (PurE)-related proteins
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4352..5284)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V7_GEMAT
putative tRNA-dihydrouridine synthase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5430..5882
DNA (453bp) protein (151aa)
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V8_GEMAT
fruA; phosphotransferase system enzyme IIA component
Phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:BAH38783.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
A3-18-all-fractions_k255_1991490_7
RLO_PLX_64_10, Bacteria

Not on your lists

5903..8068
DNA (2166bp) protein (722aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
A3-18-all-fractions_k255_1991490_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8088..9695)
DNA (1608bp) protein (536aa)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
GMP synthase [glutamine-hydrolyzing]
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9692..11035)
DNA (1344bp) protein (448aa)
Diaminopimelate decarboxylase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C512_THEGP
diaminopimelate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(11017..12465)
DNA (1449bp) protein (483aa)
Proline--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X0_GEMAT
Prolyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1991490_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(12458..13759)
DNA (1302bp) protein (434aa)
Histidyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X1_GEMAT
Histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13778..14761)
DNA (984bp) protein (328aa)
FolC bifunctional protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQE9_ANADE
FolC bifunctional protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1991490_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14801..15016)
DNA (216bp) protein (72aa)
FolC bifunctional protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W460_DYAFD
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
FolC bifunctional protein {ECO:0000313|EMBL:ACT92297.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
A3-18-all-fractions_k255_1991490_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15090..15965)
DNA (876bp) protein (292aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X3_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1991490_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16069..17310)
DNA (1242bp) protein (414aa)
Rod shape determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X4_GEMAT
mrdB; rod shape determining protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17307..19190)
DNA (1884bp) protein (628aa)
Penicillin-binding protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X5_GEMAT
mrdA; penicillin-binding protein 2
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1991490_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19187..19684)
DNA (498bp) protein (166aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X6_GEMAT
rod shape-determining protein MreD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19681..20700)
DNA (1020bp) protein (340aa)
Rod shape-determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X7_GEMAT
Rod shape-determining protein MreC
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20703..21740)
DNA (1038bp) protein (346aa)
Rod shape-determining protein MreB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X8_GEMAT
cell shape determining protein, MreB/Mrl family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1991490_20
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21827..22255)
DNA (429bp) protein (143aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
UPI0003D5B006 related cluster n=1 Tax=unknown RepID=UPI0003D5B006
deoxyuridine 5'-triphosphate nucleotidohydrolase
A3-18-all-fractions_k255_1991490_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22284..23396)
DNA (1113bp) protein (371aa)
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT
alanine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23464..23853)
DNA (390bp) protein (130aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
peptidase M16 domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1991490_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23863..24723)
DNA (861bp) protein (287aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
peptidase M16 domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1991490_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24730..26820)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_1991490_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(26923..27183)
DNA (261bp) protein (87aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1991490_26

Not on your lists

27342..27956
DNA (615bp) protein (205aa)
Marine sediment metagenome DNA, contig: S06H3_S16432 {ECO:0000313|EMBL:GAI33138.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=4763845 bin=GWA2_Planctomycetia_40_7 species=Aeromonas hydrophila genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
A3-18-all-fractions_k255_1991490_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27972..29336)
DNA (1365bp) protein (455aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] id=14625408 bin=bin7_NC10_sister species=Thioalkalivibrio sp. ALJ24 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_1991490_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29330..30520)
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
A3-18-all-fractions_k255_1991490_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30520..31392)
DNA (873bp) protein (291aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_1991490_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(31389..32132)
DNA (744bp) protein (248aa)
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 36 in total

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