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A3-18-all-fractions_k255_3629243

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3629243_1
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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77..1510
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PAS domain S-box n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Y4_DESTA
PAS domain S-box
A3-18-all-fractions_k255_3629243_2
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1507..2007
DNA (501bp) protein (167aa)
Response regulator receiver protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XDL2_9CHRO
response regulator receiver protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
A3-18-all-fractions_k255_3629243_3
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2117..2545
DNA (429bp) protein (143aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZK9_DESML
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EPR42517.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
OsmC-like protein
A3-18-all-fractions_k255_3629243_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2599..3276
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF38_CONWI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB51755.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
A3-18-all-fractions_k255_3629243_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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3261..4466
DNA (1206bp) protein (402aa)
Aminotransferase class V n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q277_CATAD
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACU77614.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
A3-18-all-fractions_k255_3629243_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4477..5082)
DNA (606bp) protein (202aa)
Lipolytic protein G-D-S-L family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEZ1_RHOM4
G-D-S-L family lipolytic protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_3629243_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5253..5867
DNA (615bp) protein (205aa)
ABC transporter related protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GPC3_9BACT
ABC transporter related protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_3629243_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5864..8398
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNA1_9BACT
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_3629243_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8429..9328
DNA (900bp) protein (300aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ6_GEMAT
enoyl-(acyl carrier protein) reductase
Enoyl-(Acyl carrier protein) reductase {ECO:0000313|EMBL:AHG89206.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
A3-18-all-fractions_k255_3629243_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9289..9699)
DNA (411bp) protein (137aa)
Response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y3_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG90064.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
A3-18-all-fractions_k255_3629243_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9891..10676
DNA (786bp) protein (262aa)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036F8749
Enoyl-CoA hydratase {ECO:0000313|EMBL:EYF07004.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
enoyl-CoA hydratase
A3-18-all-fractions_k255_3629243_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10673..11476
DNA (804bp) protein (268aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT0_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AHG91355.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
A3-18-all-fractions_k255_3629243_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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11493..12194
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B412C1
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
A3-18-all-fractions_k255_3629243_14
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12194..12562
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7C1_ANADF
Uncharacterized protein {ECO:0000313|EMBL:GAO04526.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
A3-18-all-fractions_k255_3629243_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12572..13369)
DNA (798bp) protein (266aa)
Putative CtaG protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P0_GEMAT id=5225333 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AHG89948.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
A3-18-all-fractions_k255_3629243_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13422..13778)
DNA (357bp) protein (119aa)
hypothetical protein id=24489208 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
A3-18-all-fractions_k255_3629243_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13787..14425)
DNA (639bp) protein (213aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:BAH37548.1}; EC=1.9.3.1 {ECO:0000313|EMBL:BAH37548.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cytochrome c oxidase subunit III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N8_GEMAT
A3-18-all-fractions_k255_3629243_18
unknown

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comp(14465..14539)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 18 items

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