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A3-18-all-fractions_k255_5748189

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5748189_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..1899
DNA (1899bp) protein (633aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAH40123.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH40123.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glutamate synthase [NADPH] large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC96_GEMAT
A3-18-all-fractions_k255_5748189_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1991..2695
DNA (705bp) protein (235aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U156_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH82546.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TetR family transcriptional regulator
A3-18-all-fractions_k255_5748189_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2688..4562
DNA (1875bp) protein (625aa)
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
A3-18-all-fractions_k255_5748189_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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4637..5026
DNA (390bp) protein (130aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
Putative 7-cyano-7-deazaguanine reductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F934_9DELT
A3-18-all-fractions_k255_5748189_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5046..5381)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ05_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41045.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
A3-18-all-fractions_k255_5748189_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5435..6418)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT
protein of unknown function DUF1006
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_5748189_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(6490..7002)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG70_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
A3-18-all-fractions_k255_5748189_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7013..9697)
DNA (2685bp) protein (895aa)
protein kinase
Serine/threonine protein kinase id=4260236 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_5748189_9
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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comp(9778..12396)
DNA (2619bp) protein (873aa)
TPR repeat-containing serine/threonin protein kinase id=24431878 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
transcriptional activator domain-containing protein
Tax=RBG_16_Zixibacteria_48_11_curated
A3-18-all-fractions_k255_5748189_10
unknown

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12595..13047
DNA (453bp) protein (151aa)

This feature has no annotations

A3-18-all-fractions_k255_5748189_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13079..13930)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD80_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40457.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
A3-18-all-fractions_k255_5748189_12
unknown

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comp(14073..14534)
DNA (462bp) protein (154aa)

This feature has no annotations

A3-18-all-fractions_k255_5748189_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(14596..16122)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28
Tax=RBG_16_Gemmatimonadetes_66_8_curated
A3-18-all-fractions_k255_5748189_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16322..17647
DNA (1326bp) protein (442aa)
gltA; citrate synthase (EC:2.3.3.1) id=14430702 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
Tax=GWC2_Gemmatimonadetes_71_10_curated
A3-18-all-fractions_k255_5748189_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17657..19201)
DNA (1545bp) protein (515aa)
speA; arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Biosynthetic arginine decarboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B6_GEMAT
Displaying 15 items

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