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A3-18-all-fractions_k255_143336

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_143336_1
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..790)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI0003714F9A
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04144.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
O-succinylbenzoate-CoA ligase
A3-18-all-fractions_k255_143336_2
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(790..1668)
DNA (879bp) protein (293aa)
menB; naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36] id=7720101 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
menB; naphthoate synthase (EC:4.1.3.36)
A3-18-all-fractions_k255_143336_3
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1700..2680
DNA (981bp) protein (327aa)
menC; hypothetical protein (EC:4.2.1.-)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050577};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
O-succinylbenzoate synthase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035E186D
A3-18-all-fractions_k255_143336_4
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2738..3742)
DNA (1005bp) protein (335aa)
cytochrome C biogenesis protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B35D22
Uncharacterized protein {ECO:0000313|EMBL:KJC63593.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
cytochrome biogenesis protein
A3-18-all-fractions_k255_143336_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3783..5393)
DNA (1611bp) protein (537aa)
cytochrome C biogenesis protein n=1 Tax=Microbacteriaceae RepID=UPI00037E52FB
ResB-like protein {ECO:0000313|EMBL:ERK72767.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cytochrome C biosynthesis associated protein
A3-18-all-fractions_k255_143336_6
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5377..6111)
DNA (735bp) protein (245aa)
Cytochrome C biogenesis membrane protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CNF8_CLAM3
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KFF60302.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
ccdA; cytochrome C biogenesis membrane protein
A3-18-all-fractions_k255_143336_7
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6108..6677)
DNA (570bp) protein (190aa)
lipoprotein n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629D68
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFF60303.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
thiol:disulfide interchange protein
A3-18-all-fractions_k255_143336_8
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6674..7315)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MLZ6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG62891.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
phosphatase
A3-18-all-fractions_k255_143336_9
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7575..8885
DNA (1311bp) protein (437aa)
aspartyl-tRNA synthetase n=1 Tax=Agromyces subbeticus RepID=UPI0003B54319
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KGJ72890.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
aspartyl-tRNA synthetase
A3-18-all-fractions_k255_143336_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8882..9943
DNA (1062bp) protein (354aa)
membrane protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002898D95
hypothetical protein
Conserved membrane protein {ECO:0000313|EMBL:CCE74657.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
A3-18-all-fractions_k255_143336_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10041..11339
DNA (1299bp) protein (433aa)
Conserved membrane protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CNY0_CLAM3
hypothetical protein
Conserved membrane protein {ECO:0000313|EMBL:CAN00774.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_143336_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11336..11593)
DNA (258bp) protein (86aa)
redoxin n=1 Tax=Agromyces subbeticus RepID=UPI0003B77762
Redoxin {ECO:0000313|EMBL:KDP91179.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative thioredoxin
A3-18-all-fractions_k255_143336_13
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11654..12430
DNA (777bp) protein (259aa)
serB1; putative phosphoserine phosphatase (EC:3.1.3.3)
Putative phosphoserine phosphatase {ECO:0000313|EMBL:CAN00575.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CAN00575.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Putative phosphoserine phosphatase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CND8_CLAM3
A3-18-all-fractions_k255_143336_14
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12608..12706)
DNA (99bp) protein (33aa)
PF08213 domain protein n=1 Tax=Actinomyces georgiae F0490 RepID=J0NMF9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ00360.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
A3-18-all-fractions_k255_143336_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12837..13043)
DNA (207bp) protein (69aa)
excisionase n=1 Tax=Glaciibacter superstes RepID=UPI0003B51C88
excisionase
Excisionase {ECO:0000313|EMBL:KGJ72893.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
A3-18-all-fractions_k255_143336_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13270..13701)
DNA (432bp) protein (144aa)
Transcriptional regulator, ArsR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDT7_LEIAQ
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERK73410.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ArsR family transcriptional regulator
A3-18-all-fractions_k255_143336_17
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13761..14510)
DNA (750bp) protein (250aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
proC; hypothetical protein (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B6P7_9MICO
Displaying 17 items

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