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A3-18-all-fractions_k255_3227895

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3227895_1
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(107..922)
DNA (816bp) protein (272aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J014_MYCSM
ABC transporter permease {ECO:0000313|EMBL:CDO06076.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
ABC-type spermidine/putrescine transport system, permease component II
A3-18-all-fractions_k255_3227895_2
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(919..1701)
DNA (783bp) protein (261aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JST1_9MYCO
ABC-type spermidine/putrescine transport system, permease component I
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:AGB24663.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
A3-18-all-fractions_k255_3227895_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1781..2980)
DNA (1200bp) protein (400aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J209_MYCSM
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHK95235.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
spermidine/putrescine-binding periplasmic protein
A3-18-all-fractions_k255_3227895_4
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2977..4080)
DNA (1104bp) protein (368aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:ELQ87594.1}; EC=3.6.3.31 {ECO:0000313|EMBL:ELQ87594.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
ABC transporter related protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JSS9_9MYCO
spermidine/putrescine ABC transporter ATP-binding protein
A3-18-all-fractions_k255_3227895_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4280..5035)
DNA (756bp) protein (252aa)
5-keto-D-gluconate 5-reductase {ECO:0000313|EMBL:EYD77237.1}; EC=1.1.1.69 {ECO:0000313|EMBL:EYD77237.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
gluconate 5-dehydrogenase (EC:1.1.1.69)
Gluconate 5-dehydrogenase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B2P9_RHIRD
A3-18-all-fractions_k255_3227895_6
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5063..5866)
DNA (804bp) protein (268aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EYD77235.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EYD77235.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
UPI0003CDF4BA related cluster n=1 Tax=unknown RepID=UPI0003CDF4BA
short-chain dehydrogenase/reductase SDR
A3-18-all-fractions_k255_3227895_7
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5872..6894)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GT25_9RHIZ
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:EYD77234.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
xylose isomerase domain-containing protein
A3-18-all-fractions_k255_3227895_8
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6891..7673)
DNA (783bp) protein (261aa)
IclR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7B61D
IclR family transcriptional regulator {ECO:0000313|EMBL:KDN75917.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
IclR family transcriptional regulator
A3-18-all-fractions_k255_3227895_9
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7885..8757)
DNA (873bp) protein (291aa)
Protease HtpX homolog {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Protease HtpX homolog n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=HTPX_KINRD
heat shock protein HtpX
A3-18-all-fractions_k255_3227895_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8856..10094)
DNA (1239bp) protein (413aa)
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase (Cytochrome) n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W7T3_KINRD
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:EXG82751.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
A3-18-all-fractions_k255_3227895_11

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comp(10098..11531)
DNA (1434bp) protein (478aa)
Putative rhamnulokinase id=7720321 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
FGGY family of carbohydrate kinase, C-terminal domain {ECO:0000313|EMBL:AGU09841.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
carbohydrate kinase
A3-18-all-fractions_k255_3227895_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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comp(11653..11916)
DNA (264bp) protein (88aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EAR26300.1}; EC=1.1.1.- {ECO:0000313|EMBL:EAR26300.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (EC:1.1.1.100)
Putative rhamnulose-1-phosphate aldolase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XIJ9_9MICO
Displaying 12 items

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