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A3-18-all-fractions_k255_3520455

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3520455_1
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
ATP-dependent Clp protease, ATP-binding subunit id=7720500 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ClpB protein {ECO:0000313|EMBL:EPR77468.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
clpB; ATPase with chaperone activity, ATP-binding subunit
A3-18-all-fractions_k255_3520455_2
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(738..1175)
DNA (438bp) protein (146aa)
heat-shock protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B732C8
transcriptional regulator
Strain 70137, complete genome {ECO:0000313|EMBL:AJM77064.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
A3-18-all-fractions_k255_3520455_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1333..2313)
DNA (981bp) protein (327aa)
molecular chaperone DnaJ n=1 Tax=Curtobacterium sp. B8 RepID=UPI000346355C
DnaJ region {ECO:0000313|EMBL:ERK71386.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
dnaJ; heat shock protein DnaJ (HSP40)
A3-18-all-fractions_k255_3520455_4
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2317..2910)
DNA (594bp) protein (198aa)
Protein GrpE n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM87_CLAM3
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
grpE; heat shock chaperone
A3-18-all-fractions_k255_3520455_5
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2910..4778)
DNA (1869bp) protein (623aa)
molecular chaperone DnaK n=1 Tax=Humibacter albus RepID=UPI0003B7A732
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
molecular chaperone DnaK
A3-18-all-fractions_k255_3520455_6
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5005..5322
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DC43E6
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFF60299.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein
A3-18-all-fractions_k255_3520455_7
unknown

Not on your lists

5319..5561
DNA (243bp) protein (81aa)

This feature has no annotations

A3-18-all-fractions_k255_3520455_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5579..6940
DNA (1362bp) protein (454aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RL18_LEIAQ
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK69264.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
albicidin efflux pump
A3-18-all-fractions_k255_3520455_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6951..7835)
DNA (885bp) protein (295aa)
Conserved membrane protein id=7720404 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Rhomboid family protein {ECO:0000313|EMBL:KHK95998.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
conserved membrane protein, rhomboid family
A3-18-all-fractions_k255_3520455_10
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7891..8340)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TR65_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KIC67532.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
hypothetical protein
A3-18-all-fractions_k255_3520455_11
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8427..9287)
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=7720485 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Prenyltransferase {ECO:0000313|EMBL:KJL28738.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ubiA; prenyltransferase
A3-18-all-fractions_k255_3520455_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9289..9594)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000378342F
Lycopene e-cyclase isoprenoid transferase B {ECO:0000313|EMBL:EYR63309.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
A3-18-all-fractions_k255_3520455_13
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9908..11512)
DNA (1605bp) protein (535aa)
Putative bifunctional phytoene synthase/phytoene dehydrogenase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CV34_CLAM3
Phytoene dehydrogenase {ECO:0000313|EMBL:KGM09650.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
crtBI; putative bifunctional phytoene synthase/phytoene dehydrogenase
A3-18-all-fractions_k255_3520455_14
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11509..12411)
DNA (903bp) protein (301aa)
crtBI; putative bifunctional phytoene synthase/phytoene dehydrogenase (EC:2.5.1.-)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI00031A43D2
All-trans-phytoene synthase {ECO:0000313|EMBL:CEA08964.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
A3-18-all-fractions_k255_3520455_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..13037
DNA (528bp) protein (176aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
idi; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T066_LEIAQ
A3-18-all-fractions_k255_3520455_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13073..13675)
DNA (603bp) protein (201aa)
deoxynucleotide triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:CCE76791.1};; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1ZTL5_9MICC
A3-18-all-fractions_k255_3520455_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13855..14772
DNA (918bp) protein (306aa)
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family id=7719682 bin=CNBR_ACT species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV81177.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
A3-18-all-fractions_k255_3520455_18
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14959..15432
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F9C5
Uncharacterized protein {ECO:0000313|EMBL:KGJ72874.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
A3-18-all-fractions_k255_3520455_19
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15456..15968
DNA (513bp) protein (171aa)
Hypotheical membrane protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CV72_CLAM3
hypothetical protein
Hypotheical membrane protein {ECO:0000313|EMBL:CAN03011.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_3520455_20
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15976..17337)
DNA (1362bp) protein (454aa)
Putative helicase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RDJ9_CLAMS
helicase
Putative helicase {ECO:0000313|EMBL:CAQ03128.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
A3-18-all-fractions_k255_3520455_21
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17334..19286)
DNA (1953bp) protein (651aa)
copper transporter n=1 Tax=Agromyces italicus RepID=UPI0003B622B2
Copper transporter {ECO:0000313|EMBL:KDP91934.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative copper export protein
A3-18-all-fractions_k255_3520455_22
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19381..19662)
DNA (282bp) protein (94aa)
DNA-binding protein HU n=3 Tax=Clavibacter michiganensis RepID=B0RDK8_CLAMS
hup; DNA-binding protein HU
DNA-binding protein Hu {ECO:0000313|EMBL:CCE76829.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
A3-18-all-fractions_k255_3520455_23
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19762..20067)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacteriaceae RepID=UPI00037AFDCC
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
A3-18-all-fractions_k255_3520455_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20069..20236)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSU8_LEIAQ
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
A3-18-all-fractions_k255_3520455_25
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20236..20472)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=5 Tax=Rothia RepID=D2NPI3_ROTMD
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
A3-18-all-fractions_k255_3520455_26
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20607..20993)
DNA (387bp) protein (129aa)
fur; ferric uptake regulation protein
Ferric uptake regulator, Fur family protein id=7720450 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Ferric uptake regulation protein {ECO:0000313|EMBL:CAQ03141.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
A3-18-all-fractions_k255_3520455_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20990..21892)
DNA (903bp) protein (301aa)
ABC transporter, permease protein id=7720449 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC 3 transport family protein {ECO:0000313|EMBL:ERK71888.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter permease
A3-18-all-fractions_k255_3520455_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21889..22686)
DNA (798bp) protein (266aa)
Putative metal ABC transporter, ATP-binding protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CV88_CLAM3
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP91927.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative metal ABC transporter ATP-binding protein
A3-18-all-fractions_k255_3520455_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22683..23594)
DNA (912bp) protein (304aa)
ABC transporter substrate-binding protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI000369F646
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ERK71886.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter solute binding protein
A3-18-all-fractions_k255_3520455_30
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24005..25294)
DNA (1290bp) protein (430aa)
Dihydrolipoamide acyltransferase id=7720446 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
branched-chain alpha-keto acid dehydrogenase subunit E2
Uncharacterized protein {ECO:0000313|EMBL:AGW42662.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Displaying items 1-30 of 110 in total

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