ggKbase home page

A3-18-all-fractions_k255_4222976

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_4222976_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..361)
DNA (360bp) protein (120aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM2_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-18-all-fractions_k255_4222976_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(503..1795)
DNA (1293bp) protein (431aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM0_PSEUX
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-18-all-fractions_k255_4222976_3
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1937..3022
DNA (1086bp) protein (362aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WCA6_KINRD
FMN-dependent alpha-hydroxy acid dehydrogenase
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ABS04445.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
A3-18-all-fractions_k255_4222976_4
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3025..3606)
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYL7_BEUC1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACQ78975.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
A3-18-all-fractions_k255_4222976_5
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3599..4459)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003772373
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACQ78976.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
A3-18-all-fractions_k255_4222976_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4554..5234)
DNA (681bp) protein (227aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
clpP2; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B36A66
A3-18-all-fractions_k255_4222976_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5262..5873)
DNA (612bp) protein (204aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ATP-dependent Clp protease ClpP n=1 Tax=Glaciibacter superstes RepID=UPI0003B6835F
ATP-dependent Clp protease proteolytic subunit
A3-18-all-fractions_k255_4222976_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6091..6585)
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PQ70_KRIFD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB34772.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
A3-18-all-fractions_k255_4222976_9
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6582..6890)
DNA (309bp) protein (103aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NGL6_9ACTO
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AEN14129.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
A3-18-all-fractions_k255_4222976_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6907..8262)
DNA (1356bp) protein (452aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Trigger factor n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP18_LEIAQ
tig; trigger factor, peptidyl-prolyl cis-trans isomerase
A3-18-all-fractions_k255_4222976_11
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8551..9066)
DNA (516bp) protein (172aa)
DNA-binding protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7A0B7
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:BAK34702.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
A3-18-all-fractions_k255_4222976_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9175..9750)
DNA (576bp) protein (192aa)
DoxX family protein n=1 Tax=Humibacter albus RepID=UPI0003B45D6A
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ADB52328.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
A3-18-all-fractions_k255_4222976_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9806..10678)
DNA (873bp) protein (291aa)
Luciferase-like monooxygenase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AD20_THECD
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACY99329.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A3-18-all-fractions_k255_4222976_14
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10711..11481)
DNA (771bp) protein (257aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C74EBE
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KJS63225.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
glycosyl transferase
A3-18-all-fractions_k255_4222976_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11516..13060)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000370A6BE
Uncharacterized protein {ECO:0000313|EMBL:KHK99469.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
A3-18-all-fractions_k255_4222976_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13057..14502)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ATPase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XRU9_9ACTO
two-component system sensor kinase
A3-18-all-fractions_k255_4222976_17
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14499..15161)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036B6FF6
Regulator {ECO:0000313|EMBL:KJR11613.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
transcriptional regulator
A3-18-all-fractions_k255_4222976_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15163..15696)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C7D58
Uncharacterized protein {ECO:0000313|EMBL:KJL31770.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
A3-18-all-fractions_k255_4222976_19
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15702..16184)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003B396B6
Uncharacterized protein {ECO:0000313|EMBL:EYT64177.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
A3-18-all-fractions_k255_4222976_20
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16168..16788)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI000311A7CF
Contig_42, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02695.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein
A3-18-all-fractions_k255_4222976_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16912..17700
DNA (789bp) protein (263aa)
Uncharacterized membrane-anchored protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4B2_CLOPA
uncharacterized membrane-anchored protein
Uncharacterized membrane-anchored protein {ECO:0000313|EMBL:AGK96521.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
A3-18-all-fractions_k255_4222976_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17711..18460)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000361B9BD
Uncharacterized protein {ECO:0000313|EMBL:ERK71300.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
A3-18-all-fractions_k255_4222976_23
unknown

Not on your lists

18540..18737
DNA (198bp) protein (66aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_24
unknown

Not on your lists

comp(18753..18947)
DNA (195bp) protein (65aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_25
unknown

Not on your lists

19073..19342
DNA (270bp) protein (90aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_26
unknown

Not on your lists

19517..19690
DNA (174bp) protein (58aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_27
unknown

Not on your lists

comp(19710..19946)
DNA (237bp) protein (79aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_28
unknown

Not on your lists

comp(20036..20860)
DNA (825bp) protein (275aa)

This feature has no annotations

A3-18-all-fractions_k255_4222976_29
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21076..24180
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037401E3
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KJL30813.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
winged helix family transcriptional regulator
A3-18-all-fractions_k255_4222976_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24232..25041)
DNA (810bp) protein (270aa)
ABC transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360370B
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
antibiotic export permease
Displaying items 1-30 of 39 in total

View Taxonomy