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A3-18-all-fractions_k255_4676764

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_4676764_1
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1631)
DNA (1629bp) protein (543aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037F0D3D
A3-18-all-fractions_k255_4676764_2
unknown

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comp(1635..1814)
DNA (180bp) protein (60aa)

This feature has no annotations

A3-18-all-fractions_k255_4676764_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2725..2904
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037F627B
Uncharacterized protein {ECO:0000313|EMBL:ERK73430.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
A3-18-all-fractions_k255_4676764_4
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2972..3601)
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036AD5AD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
30S ribosomal protein S4
A3-18-all-fractions_k255_4676764_5
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3790..5151)
DNA (1362bp) protein (454aa)
ATPase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDG2_9MICO
ATPase
ATPase {ECO:0000313|EMBL:CCE75727.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
A3-18-all-fractions_k255_4676764_6
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5302..6090
DNA (789bp) protein (263aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUD1_LEIAQ
Peptidylprolyl isomerase {ECO:0000313|EMBL:KJC65370.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
peptidylprolyl isomerase
A3-18-all-fractions_k255_4676764_7
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6145..7419
DNA (1275bp) protein (425aa)
ATPase n=1 Tax=Humibacter albus RepID=UPI0003B65D54
DNA repair ATPase
ATPase involved in DNA repair {ECO:0000313|EMBL:AAT88938.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
A3-18-all-fractions_k255_4676764_8
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7520..8110
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CS00_CLAM3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN01863.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_4676764_9
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8089..10347)
DNA (2259bp) protein (753aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
Guanosine-3'''',5''''-bis(Diphosphate) 3''''-pyrophosphohydrolase n=1 Tax=Agromyces italicus RepID=UPI0003B2F39D
GTP pyrophosphokinase {ECO:0000313|EMBL:KGJ79198.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
A3-18-all-fractions_k255_4676764_10
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10451..11440)
DNA (990bp) protein (330aa)
Protein-export membrane protein SecF n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0REC3_CLAMS
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
secF; preprotein translocase subunit SecF
A3-18-all-fractions_k255_4676764_11
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11440..13185)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036436AA
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
preprotein translocase subunit SecD
A3-18-all-fractions_k255_4676764_12
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

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comp(13306..13755)
DNA (450bp) protein (150aa)
preprotein translocase subunit YajC n=1 Tax=Humibacter albus RepID=UPI0003B5A675
Uncharacterized protein {ECO:0000313|EMBL:KGA06909.1}; TaxID=1504316 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-1.;"
preprotein translocase subunit YajC
A3-18-all-fractions_k255_4676764_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13858..14895)
DNA (1038bp) protein (346aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=7722102 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Holliday junction DNA helicase RuvB
A3-18-all-fractions_k255_4676764_14
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14892..15512)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=7722101 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Holliday junction DNA helicase RuvA
A3-18-all-fractions_k255_4676764_15
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15665..15955)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI05_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM15209.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
A3-18-all-fractions_k255_4676764_16
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16097..16651)
DNA (555bp) protein (185aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037D48F9
A3-18-all-fractions_k255_4676764_17
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(16655..16852)
DNA (198bp) protein (66aa)
Probable transcriptional regulatory protein Bcav_1989 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=Y1989_BEUC1
hypothetical protein
Probable transcriptional regulatory protein Bcav_1989 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 17 items

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