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A3-18-all-fractions_k255_5491743

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5491743_1
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..333
DNA (333bp) protein (111aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
carbamoyl phosphate synthase small subunit n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B363C3
carbamoyl-phosphate synthase small subunit
A3-18-all-fractions_k255_5491743_2
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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459..3761
DNA (3303bp) protein (1101aa)
Carbamoyl-phosphate synthase large chain {ECO:0000255|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000255|HAMAP-Rule:MF_01210}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
carB; carbamoylphosphate synthetase large chain (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000361A494
A3-18-all-fractions_k255_5491743_3
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3758..4624
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000376007A
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KFF60609.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
orotidine 5'-phosphate decarboxylase
A3-18-all-fractions_k255_5491743_4
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4641..5537
DNA (897bp) protein (299aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
gmkA; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] id=7722137 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
gmk; guanylate kinase (GMP kinase)/integration host factor (IHF) fusion protein (EC:2.7.4.8)
A3-18-all-fractions_k255_5491743_5
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5632..5883
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Agromyces subbeticus RepID=UPI0003B613D3
DNA-directed RNA polymerase subunit omega
A3-18-all-fractions_k255_5491743_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5938..7167
DNA (1230bp) protein (410aa)
coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5)
Coenzyme A biosynthesis bifunctional protein {ECO:0000313|EMBL:CAQ02121.1}; EC=6.3.2.5 {ECO:0000313|EMBL:CAQ02121.1};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
Coenzyme A biosynthesis bifunctional protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0REV5_CLAMS
A3-18-all-fractions_k255_5491743_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7198..8388
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Agromyces italicus RepID=UPI0003B32227
A3-18-all-fractions_k255_5491743_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8394..10160
DNA (1767bp) protein (589aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
preprotein translocase subunit SecA n=1 Tax=Glaciibacter superstes RepID=UPI0003B2FEF5
primosomal protein N' (replication factor Y) - superfamily II helicase
A3-18-all-fractions_k255_5491743_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10222..11136
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
Methionyl-tRNA formyltransferase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=FMT_CLAM3
fmtA; hypothetical protein
A3-18-all-fractions_k255_5491743_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11133..12512
DNA (1380bp) protein (460aa)
Conserved hypothetical Sun-family protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0REV1_CLAMS
RNA-binding protein {ECO:0000313|EMBL:KDP90035.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative rRNA cytosine-C5-methylases
A3-18-all-fractions_k255_5491743_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12561..13211
DNA (651bp) protein (217aa)
rpeA; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CCE75698.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CCE75698.1};; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B994_9MICO
A3-18-all-fractions_k255_5491743_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13304..13567
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00037F919D
phosphoribosyl-ATP diphosphatase
A3-18-all-fractions_k255_5491743_13
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13608..14447
DNA (840bp) protein (280aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
ATP phosphoribosyltransferase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B42F2C
ATP phosphoribosyltransferase
A3-18-all-fractions_k255_5491743_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14451..15233
DNA (783bp) protein (261aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
imidazole glycerol phosphate synthase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5F6E2
A3-18-all-fractions_k255_5491743_15
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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15230..15610
DNA (381bp) protein (127aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034D0427
A3-18-all-fractions_k255_5491743_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15616..17160
DNA (1545bp) protein (515aa)
trpE1; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I {ECO:0000313|EMBL:CAN01823.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CAN01823.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Anthranilate synthase component I n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CRW0_CLAM3
A3-18-all-fractions_k255_5491743_17
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17157..17765
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B700D2
Uncharacterized protein {ECO:0000313|EMBL:KJC65833.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
A3-18-all-fractions_k255_5491743_18
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17777..18004
DNA (228bp) protein (76aa)
membrane protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003742EAC
Membrane protein {ECO:0000313|EMBL:KHL05174.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
integral membrane protein
A3-18-all-fractions_k255_5491743_19
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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18181..18816
DNA (636bp) protein (212aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
indole-3-glycerol-phosphate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376E554
indole-3-glycerol phosphate synthase
A3-18-all-fractions_k255_5491743_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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18813..19592
DNA (780bp) protein (260aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Leifsonia sp. 109 RepID=UPI0003827CDD
Displaying 20 items

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