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A3-18-all-fractions_k255_5742293

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5742293_1
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5..1819)
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035E9FC3
ABC transporter {ECO:0000313|EMBL:KGJ71975.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
putative ABC transporter fused permease and ATP-binding protein
A3-18-all-fractions_k255_5742293_2
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2125..3690)
DNA (1566bp) protein (522aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RIA1_CLAMS
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
A3-18-all-fractions_k255_5742293_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3687..4277)
DNA (591bp) protein (197aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00037D86F1
phosphoribosylglycinamide formyltransferase
A3-18-all-fractions_k255_5742293_4
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4287..5360)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B798F4
Uncharacterized protein {ECO:0000313|EMBL:AJW79932.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical protein
A3-18-all-fractions_k255_5742293_5
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5507..6391)
DNA (885bp) protein (295aa)
sucD; hypothetical protein (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CAN02630.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Clavibacter michiganensis RepID=A5CU43_CLAM3
A3-18-all-fractions_k255_5742293_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6409..7572)
DNA (1164bp) protein (388aa)
sucC; hypothetical protein (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000313|EMBL:CCE76438.1};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAZ0_9MICO
A3-18-all-fractions_k255_5742293_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7714..8241
DNA (528bp) protein (176aa)
MarR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035F1CB0
marR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCH12425.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
A3-18-all-fractions_k255_5742293_8
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8317..8742)
DNA (426bp) protein (142aa)
acetyltransferase GCN5 n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B357ED
Contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04050.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
HD phosphohydrolase
A3-18-all-fractions_k255_5742293_9
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8745..11036)
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T0V2_LEIAQ
ATP-dependent DNA helicase
A3-18-all-fractions_k255_5742293_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11048..12007)
DNA (960bp) protein (320aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5FF61
glpQ1; hypothetical protein
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KDP91713.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
A3-18-all-fractions_k255_5742293_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12075..12629
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIP7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR25022.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
A3-18-all-fractions_k255_5742293_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12686..13465
DNA (780bp) protein (260aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B65553
Membrane protein {ECO:0000313|EMBL:KDP91714.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
hypothetical protein
A3-18-all-fractions_k255_5742293_13
unknown

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13533..14453
DNA (921bp) protein (307aa)

This feature has no annotations

A3-18-all-fractions_k255_5742293_14
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14573..15520
DNA (948bp) protein (316aa)
diguanylate cyclase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5848C
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EPR76159.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
esterase containing a GAF sensor domain
A3-18-all-fractions_k255_5742293_15
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15466..15789
DNA (324bp) protein (108aa)
GAR sensor-containing protein serine phosphatase id=7722264 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERI40126.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
sensory box/GGDEF/GAF/EAL domain protein
A3-18-all-fractions_k255_5742293_16
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15884..16777
DNA (894bp) protein (298aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V3S7_9MICC
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMY34722.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
short chain dehydrogenase/oxidoreductase
A3-18-all-fractions_k255_5742293_17
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16998..18545)
DNA (1548bp) protein (516aa)
guaA; GMP synthase (glutamine-hydrolyzing) (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BB22_9MICO
A3-18-all-fractions_k255_5742293_18
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18741..19637
DNA (897bp) protein (299aa)
allantoin permease, partial n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B33B8D
Cytosine/purine/uracil/thiamine/allantoin permease family protein {ECO:0000313|EMBL:CEL18286.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
cytosine/purines uracil thiamine allantoin permease
Displaying 18 items

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