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A3-18-all-fractions_k255_6157022

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_6157022_1
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..484
DNA (483bp) protein (161aa)
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CTY0_CLAM3
putative sugar ABC transporter ATP-binding protein
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAN02566.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_6157022_2
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

493..1776
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CTY1_CLAM3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN02567.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_6157022_3
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2206..3174)
DNA (969bp) protein (323aa)
tRNA/rRNA methyltransferase protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ADI2_LEIXX
tRNA/rRNA methyltransferase protein
tRNA/rRNA methyltransferase protein {ECO:0000313|EMBL:AAT89564.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
A3-18-all-fractions_k255_6157022_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3164..4606)
DNA (1443bp) protein (481aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cysS1; hypothetical protein (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035FDE83
A3-18-all-fractions_k255_6157022_5
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4616..5743)
DNA (1128bp) protein (376aa)
ispDF; bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RAX0_CLAMS
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
A3-18-all-fractions_k255_6157022_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5776..6258)
DNA (483bp) protein (161aa)
CarD-like transcriptional regulator n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3N1_9MICO
CarD-like transcriptional regulator {ECO:0000313|EMBL:EPR76297.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
transcriptional regulator, CarD-like regulator
A3-18-all-fractions_k255_6157022_7
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6438..7007
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B30207
Uncharacterized protein {ECO:0000313|EMBL:KJC65223.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7023..7724)
DNA (702bp) protein (234aa)
Two-component system regulatory protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PBF9_LEIXC
two-component system regulatory protein
Uncharacterized protein {ECO:0000313|EMBL:AGW40828.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
A3-18-all-fractions_k255_6157022_9
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7721..8893)
DNA (1173bp) protein (391aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Two-component system, sensor protein id=7721078 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
putative two-component system sensor kinase
A3-18-all-fractions_k255_6157022_10
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9041..9694
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDU1_9MICO
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
phoU; phosphate transport system regulator
A3-18-all-fractions_k255_6157022_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9787..10545)
DNA (759bp) protein (253aa)
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000255|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000255|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000255|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000255|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000255|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000255|HAMAP-Rule:MF_01039};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=GPMA_CLAM3
A3-18-all-fractions_k255_6157022_12
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10603..11376
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B282C
Uncharacterized protein {ECO:0000313|EMBL:KJL20980.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_13
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11381..12481)
DNA (1101bp) protein (367aa)
Putative integral membrane protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RAW1_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW79888.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
A3-18-all-fractions_k255_6157022_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12486..13613)
DNA (1128bp) protein (376aa)
Putative aminomethyltransferase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RAW0_CLAMS
aminomethyltransferase
Putative aminomethyltransferase {ECO:0000313|EMBL:CAQ02807.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
A3-18-all-fractions_k255_6157022_15
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13752..14237
DNA (486bp) protein (162aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI42_CELFN
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ADG75387.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
A3-18-all-fractions_k255_6157022_16
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14271..14825)
DNA (555bp) protein (185aa)
fatty acid-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B65B10
UPF0678 fatty acid-binding protein-like protein JF66_06985 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_17
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14903..15013)
DNA (111bp) protein (37aa)
Membrane protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDE0_9MICO
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92207.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_18
unknown

Not on your lists

comp(15051..15320)
DNA (270bp) protein (90aa)

This feature has no annotations

A3-18-all-fractions_k255_6157022_19
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15430..16119
DNA (690bp) protein (230aa)
Transcriptional regulatory protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQS4_LEIAQ
Transcriptional regulator {ECO:0000313|EMBL:KJC65211.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
glnR; transcriptional regulator
A3-18-all-fractions_k255_6157022_20
unknown

Not on your lists

16116..16535
DNA (420bp) protein (140aa)

This feature has no annotations

A3-18-all-fractions_k255_6157022_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16585..17136
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI0003671C6C
Uncharacterized protein {ECO:0000313|EMBL:ERK72650.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17211..19385
DNA (2175bp) protein (725aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ppkA; polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B2F50D
A3-18-all-fractions_k255_6157022_23
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19382..20332
DNA (951bp) protein (317aa)
DNA mismatch repair protein MutT n=1 Tax=Agromyces subbeticus RepID=UPI0003B48B1D
Contig_101, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01977.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
NUDIX hydrolase
A3-18-all-fractions_k255_6157022_24
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20535..21644
DNA (1110bp) protein (370aa)
Phosphate-binding protein PstS n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9P4_LEIAQ
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
phosphate ABC transporter substrate-binding protein
A3-18-all-fractions_k255_6157022_25
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21726..22676
DNA (951bp) protein (317aa)
phosphate ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CBDDA
Phosphate ABC transporter permease {ECO:0000313|EMBL:KFF60062.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
pstC; phosphate ABC transporter, permease component
A3-18-all-fractions_k255_6157022_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22676..23752
DNA (1077bp) protein (359aa)
phosphate ABC transporter permease n=1 Tax=Leifsonia sp. 109 RepID=UPI00037FB751
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ERK71414.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter permease
A3-18-all-fractions_k255_6157022_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23780..24559
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphate ABC transporter ATP-binding protein n=1 Tax=Microbacteriaceae RepID=UPI000369543A
phosphate transporter ATP-binding protein
A3-18-all-fractions_k255_6157022_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24595..25404)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CU05_CLAM3
Anti-sigma K factor {ECO:0000313|EMBL:KDP90855.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
hypothetical protein
A3-18-all-fractions_k255_6157022_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25401..25991)
DNA (591bp) protein (197aa)
RNA polymerase sigma factor id=7721048 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
sigK; RNA polymerase sigma factor SigK
Putative RNA polymerase sigma factor, ECF family {ECO:0000313|EMBL:CAN02592.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
A3-18-all-fractions_k255_6157022_30
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26213..26845)
DNA (633bp) protein (211aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Humibacter albus RepID=UPI0003B4EB48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42233.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Displaying items 1-30 of 31 in total

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