ggKbase home page

A3-18-all-fractions_k255_182795

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_182795_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..819)
DNA (819bp) protein (273aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
lysS; lysyl-tRNA synthetase LysS (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSL4_9BURK
A3-18-all-fractions_k255_182795_2
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

940..1482
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1092 RepID=R5PMJ2_9BACT
Transferase {ECO:0000313|EMBL:KIE44154.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hexapeptide repeat of succinyl-transferase family protein
A3-18-all-fractions_k255_182795_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1491..2579
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Escherichia coli AI27 RepID=I1B8X5_ECOLX
Putative glycosyltransferase {ECO:0000313|EMBL:BAQ01389.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
A3-18-all-fractions_k255_182795_4
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2589..3347
DNA (759bp) protein (253aa)
Macrocin-O-methyltransferase n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N3Q4_9CYAN
Macrocin-O-methyltransferase {ECO:0000313|EMBL:ELS33340.1}; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
methyltransferase
A3-18-all-fractions_k255_182795_5
unknown

Not on your lists

3358..4632
DNA (1275bp) protein (425aa)

This feature has no annotations

A3-18-all-fractions_k255_182795_6
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4644..5567
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BSX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80988.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
methyltransferase family protein
A3-18-all-fractions_k255_182795_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5564..6661
DNA (1098bp) protein (366aa)
Glycosyl transferase group 1 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A998_THECD
group 1 glycosyl transferase protein
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACY96794.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A3-18-all-fractions_k255_182795_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6658..7692
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375B355
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:GAD24353.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
glycosyl transferase
A3-18-all-fractions_k255_182795_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7698..8402
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000374BF62
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EHR72940.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
type 11 methyltransferase
A3-18-all-fractions_k255_182795_10
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8439..8693
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003750538
Uncharacterized protein {ECO:0000313|EMBL:EXI72064.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
A3-18-all-fractions_k255_182795_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8704..9132
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
twitching motility protein PilT n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624EA6
PilT domain-containing protein
A3-18-all-fractions_k255_182795_12
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9137..10306
DNA (1170bp) protein (390aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:EWS61171.1}; EC=2.6.1.87 {ECO:0000313|EMBL:EWS61171.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
spore coat protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003772E59
lipopolysaccharide biosynthesis protein
A3-18-all-fractions_k255_182795_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10312..10908
DNA (597bp) protein (199aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSK7_9BURK
sugar transferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_182795_14
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..12802
DNA (1881bp) protein (627aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XW49_LEPCP
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:KDB52257.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
polysaccharide biosynthesis protein CapD
A3-18-all-fractions_k255_182795_15
Capnocytophaga sp. oral taxon 324, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12738..13910)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 324 str. F0483 RepID=L1PBU0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY13153.1}; TaxID=1127691 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 324 str. F0483.;"
hypothetical protein
A3-18-all-fractions_k255_182795_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13907..14482)
DNA (576bp) protein (192aa)
Fusion of GMHP sugar kinase and isomerase n=1 Tax=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) RepID=C4K312_HAMD5
fusion of GMHP sugar kinase and isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
A3-18-all-fractions_k255_182795_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14486..15472)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031E40F6
GHMP kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
A3-18-all-fractions_k255_182795_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15469..16065)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000361A9BA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 18 items

View Taxonomy