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A3-18-all-fractions_k255_522595

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_522595_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11..622)
DNA (612bp) protein (204aa)
Putative transcription modulator protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNY5_9BURK
sspA; stringent starvation protein A SspA
Stringent starvation protein A SspA {ECO:0000313|EMBL:BAL94392.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_522595_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(743..1513)
DNA (771bp) protein (257aa)
cytochrome c1 (EC:1.10.2.2)
Cytochrome c1 {ECO:0000313|EMBL:ABM93813.1}; EC=1.10.2.2 {ECO:0000313|EMBL:ABM93813.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Cytochrome c1 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE24_METPP
A3-18-all-fractions_k255_522595_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1543..2943)
DNA (1401bp) protein (467aa)
cytochrome B (EC:1.10.2.2)
cytochrome B n=1 Tax=Caldimonas manganoxidans RepID=UPI00036DD2F5
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_522595_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2979..3578)
DNA (600bp) protein (200aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2H1_ACIDE
ubiquinol-cytochrome c reductase, iron-sulfur subunit
A3-18-all-fractions_k255_522595_5
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3794..4207
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=MSCL_METPP
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000255|HAMAP-Rule:MF_00115}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_522595_6
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..6949
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE20_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93809.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_522595_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6946..7983)
DNA (1038bp) protein (346aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHH0_9BURK
A3-18-all-fractions_k255_522595_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8037..9206
DNA (1170bp) protein (390aa)
HtrA-like serine protease signal peptide protein (EC:3.4.21.-)
Putative HtrA-like serine protease signal peptide protein {ECO:0000313|EMBL:ABM93806.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABM93806.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Putative HtrA-like serine protease signal peptide protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE17_METPP
A3-18-all-fractions_k255_522595_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9207..9995)
DNA (789bp) protein (263aa)
twin-arginine protein translocation system subunit TatC n=1 Tax=Caldimonas manganoxidans RepID=UPI00036B20EB
Sec-independent protein translocase TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_522595_10
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10003..10488)
DNA (486bp) protein (162aa)
Sec-independent protein translocase protein TatB n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=TATB_METPP
tatB; sec-independent translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_522595_11
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..10753)
DNA (234bp) protein (78aa)
Sec-independent protein translocase protein TatA n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHG4_9BURK
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
tatA; twin arginine translocase A
A3-18-all-fractions_k255_522595_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10798..11145)
DNA (348bp) protein (116aa)
Putative histidine triad (HIT) protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMZ3_RUBGI
putative histidine triad (HIT) protein
Putative histidine triad (HIT) protein {ECO:0000313|EMBL:BAL94380.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_522595_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11158..11535)
DNA (378bp) protein (126aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE12_METPP
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABM93801.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_522595_14
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11532..11882)
DNA (351bp) protein (117aa)
phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=HIS2_METPP
A3-18-all-fractions_k255_522595_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11879..12268)
DNA (390bp) protein (130aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQK1_VARPS
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
A3-18-all-fractions_k255_522595_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12286..12711)
DNA (426bp) protein (142aa)
putative hydrolase (EC:3.6.1.-)
Putative hydrolase {ECO:0000313|EMBL:BAL94376.1}; EC=3.6.1.- {ECO:0000313|EMBL:BAL94376.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative hydrolase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMY9_RUBGI
A3-18-all-fractions_k255_522595_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12708..13574)
DNA (867bp) protein (289aa)
AAA ATPase family protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNW8_9BURK
AAA ATPase family protein {ECO:0000313|EMBL:EGJ10036.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_522595_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13621..14283)
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYT3_LEPCP
slmA; nucleoid occlusion protein
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACB32817.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_522595_19
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14267..14992)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036F1733
Pyrimidine 5'-nucleotidase {ECO:0000313|EMBL:KDB52813.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
pyrimidine 5'-nucleotidase
A3-18-all-fractions_k255_522595_20
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14989..15648)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X333_9BURK
adenosine nucleotide hydrolase
Adenosine nucleotide hydrolase {ECO:0000313|EMBL:AKC69060.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
A3-18-all-fractions_k255_522595_21

Not on your lists

comp(15682..16611)
DNA (930bp) protein (310aa)
Acetylglutamate kinase (NAG kinase) (AGK) (N-acetyl-L-glutamate 5-phosphotransferase) {ECO:0000313|EMBL:CBH98312.1}; EC=2.7.2.8 {ECO:0000313|EMBL:CBH98312.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acetylglutamate kinase (EC:2.7.2.8)
acetylglutamate kinase n=1 Tax=Caldimonas manganoxidans RepID=UPI000365D9F8
A3-18-all-fractions_k255_522595_22
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16787..17335)
DNA (549bp) protein (183aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RUVC_METPP
A3-18-all-fractions_k255_522595_23
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17344..18315)
DNA (972bp) protein (324aa)
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SD06_METPP
CDP-diglyceride synthase {ECO:0000313|EMBL:EWS58893.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_522595_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18324..18941)
DNA (618bp) protein (206aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJB6_9BURK
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EHR70071.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
acyltransferase
A3-18-all-fractions_k255_522595_25
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18974..20554)
DNA (1581bp) protein (527aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036A33E9
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
A3-18-all-fractions_k255_522595_26
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20592..20828)
DNA (237bp) protein (79aa)
Fis family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI0003774817
Hin recombinational enhancer-binding protein {ECO:0000313|EMBL:EWS55984.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
DNA-binding protein Fis
A3-18-all-fractions_k255_522595_27
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20875..21921)
DNA (1047bp) protein (349aa)
tRNA-dihydrouridine synthase B (EC:1.-.-.-)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
tRNA-dihydrouridine synthase B n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A236B
A3-18-all-fractions_k255_522595_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22039..22509
DNA (471bp) protein (157aa)
Putative transmembrane protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNV9_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EGJ10027.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_522595_29
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22513..23040)
DNA (528bp) protein (176aa)
Poly(Hydroxyalcanoate) granule associated protein (Phasin) n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHE6_9BURK
Poly(Hydroxyalcanoate) granule associated protein (Phasin) {ECO:0000313|EMBL:EHR70078.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
polygranule-associated protein
A3-18-all-fractions_k255_522595_30
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23211..25208
DNA (1998bp) protein (666aa)
Conserved hypothetical short chain dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SD14_METPP
Conserved hypothetical short chain dehydrogenase {ECO:0000313|EMBL:ABM93453.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
short chain dehydrogenase
Displaying items 1-30 of 45 in total

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