ggKbase home page

A3-18-all-fractions_k255_673911

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_673911_1
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(520..1551)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DC3B26
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:BAP87221.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
A3-18-all-fractions_k255_673911_2
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1896..2912)
DNA (1017bp) protein (339aa)
DNA repair protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036828EB
ku protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-18-all-fractions_k255_673911_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3014..4291)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QDZ1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA94268.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
A3-18-all-fractions_k255_673911_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4467..6017
DNA (1551bp) protein (517aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Probable DNA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6Z4_SORCE
A3-18-all-fractions_k255_673911_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6032..6490
DNA (459bp) protein (153aa)
gentamicin 3'-N-acetyltransferase (EC:2.3.1.60)
Gentamicin 3'-N-acetyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6U6_PARDP
Gentamicin 3-n-acetyltransferase {ECO:0000313|EMBL:EIK89209.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
A3-18-all-fractions_k255_673911_6
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7112..8737
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037BC1B2
two-component sensor protein
Putative two-component sensor protein {ECO:0000313|EMBL:CAI08226.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
A3-18-all-fractions_k255_673911_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8734..9528
DNA (795bp) protein (265aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M1_RHOFD
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABD68532.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9512..10168
DNA (657bp) protein (219aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220L7_RHOFD
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABD68536.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_9
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10352..10831
DNA (480bp) protein (160aa)
Response regulator receiver domain protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220L6_RHOFD
response regulator receiver domain-containing protein
Response regulator receiver domain protein {ECO:0000313|EMBL:ABD68537.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11021..11221
DNA (201bp) protein (67aa)
Flp/Fap pilin component n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YP53_BURA4
Flp/Fap pilin component
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
A3-18-all-fractions_k255_673911_11
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11292..11867
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMS9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHA76174.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
cpaA; Flp pilus assembly protein, protease CpaA
A3-18-all-fractions_k255_673911_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11898..12743
DNA (846bp) protein (282aa)
Flp pilus assembly CpaB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220L1_RHOFD
Flp pilus assembly CpaB
Flp pilus assembly CpaB {ECO:0000313|EMBL:ABD68542.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12743..14509
DNA (1767bp) protein (589aa)
Probable outer membrane channel protein,probably involved in pilus assembly n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P398_AROAE
cpaC; outer membrane channel protein
Probable outer membrane channel protein,probably involved in pilus assembly {ECO:0000313|EMBL:CAI08216.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
A3-18-all-fractions_k255_673911_14
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14519..14800
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P399_AROAE
pilus-associated lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CAI08215.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
A3-18-all-fractions_k255_673911_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14821..16095
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036243CE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
A3-18-all-fractions_k255_673911_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16092..16565
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003613A60
Flp pilus assembly protein TadG
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
A3-18-all-fractions_k255_673911_17
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16562..17020
DNA (459bp) protein (153aa)
Flp pilus assembly protein TadG n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X5H1_9BURK
pilus assembly protein TadG
Pilus assembly protein TadG {ECO:0000313|EMBL:AJC20719.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
A3-18-all-fractions_k255_673911_18
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17037..18200
DNA (1164bp) protein (388aa)
Response regulator receiver domain protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220K5_RHOFD
response regulator receiver domain-containing protein
Response regulator receiver domain protein {ECO:0000313|EMBL:ABD68548.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_19
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18241..19602
DNA (1362bp) protein (454aa)
Secretion ATPase protein, type II secretion system protein E n=1 Tax=Azoarcus sp. KH32C RepID=H0PVW9_9RHOO
tadA_capF; secretion ATPase protein, type II secretion system protein E
Secretion ATPase protein, type II secretion system protein E {ECO:0000313|EMBL:BAL26421.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
A3-18-all-fractions_k255_673911_20
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19605..20579
DNA (975bp) protein (325aa)
Type II secretion system protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220K3_RHOFD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABD68550.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20598..21542
DNA (945bp) protein (315aa)
Type II secretion system protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220K2_RHOFD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABD68551.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_22
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21586..22815
DNA (1230bp) protein (410aa)
Tetratricopeptide TPR_2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220K1_RHOFD
hypothetical protein
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABD68552.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_673911_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22757..24139)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F1172
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17785.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
A3-18-all-fractions_k255_673911_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24136..27693)
DNA (3558bp) protein (1186aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CT63_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18188.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-18-all-fractions_k255_673911_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27744..28436)
DNA (693bp) protein (231aa)
Urea ABC transporter ATP-binding protein UrtE n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LME7_9BURK
Urea ABC transporter ATP-binding protein UrtE {ECO:0000313|EMBL:EGJ09515.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
urtE; ABC transporter ATP-binding protein UrtE
A3-18-all-fractions_k255_673911_26
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28439..29326)
DNA (888bp) protein (296aa)
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:EWS61002.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EWS61002.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
urea ABC transporter ATP-binding protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035FD865
branched-chain amino acid ABC transporter ATP-binding protein
A3-18-all-fractions_k255_673911_27
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29323..30426)
DNA (1104bp) protein (368aa)
amino acid ABC transporter permease n=1 Tax=Ideonella sp. B508-1 RepID=UPI000345BAD2
permease transporter transmembrane protein
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:EWS56414.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Displaying 27 items

View Taxonomy