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A3-18-all-fractions_k255_1277273

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_1277273_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..674)
DNA (672bp) protein (224aa)
aconitase (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Caldimonas manganoxidans RepID=UPI000362DD23
Tax=GWA2_Burkholderiales_64_37_curated
A3-18-all-fractions_k255_1277273_2
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(780..4574)
DNA (3795bp) protein (1265aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003803456
multi-sensor hybrid histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_1277273_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4684..7269)
DNA (2586bp) protein (862aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Aconitate hydratase 2 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y566_RAMTT
acnB; Aconitase 2
A3-18-all-fractions_k255_1277273_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7295..7699)
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Ribonuclease VapC n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFI7_METPP
hypothetical protein
A3-18-all-fractions_k255_1277273_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7696..7971)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CML1_STEMA
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EJP77411.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
A3-18-all-fractions_k255_1277273_6
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8084..8554)
DNA (471bp) protein (157aa)
Putative signal peptide protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFI9_METPP
signal peptide protein
Uncharacterized protein {ECO:0000313|EMBL:EWS62187.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_1277273_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8862..9857)
DNA (996bp) protein (332aa)
Putative lyase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH7_RUBGI
putative lyase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_1277273_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9863..10849)
DNA (987bp) protein (329aa)
malate dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003657F7C
malate dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-18-all-fractions_k255_1277273_9
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11030..11758
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000374549C
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_1277273_10

Not on your lists

11896..12324
DNA (429bp) protein (143aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase cytochrome b (Fragment) n=1 Tax=sediment metagenome RepID=D9PG59_9ZZZZ
Succinate dehydrogenase cytochrome b {ECO:0000313|EMBL:EFK97455.1}; Flags: Fragment;; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
A3-18-all-fractions_k255_1277273_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12336..12755
DNA (420bp) protein (140aa)
sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit SdhD (EC:1.3.99.1)
Succinate dehydrogenase hydrophobic membrane anchor subunit SdhD {ECO:0000313|EMBL:BAL94568.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAL94568.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
succinate dehydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A3FA1
A3-18-all-fractions_k255_1277273_12

Not on your lists

12755..14557
DNA (1803bp) protein (601aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:EFK96450.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFK96450.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
succinate dehydrogenase subunit A (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=sediment metagenome RepID=D9PJ19_9ZZZZ
A3-18-all-fractions_k255_1277273_13

Not on your lists

14581..15285
DNA (705bp) protein (235aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:EFK96449.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFK96449.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=sediment metagenome RepID=D9PJ18_9ZZZZ
sdhB; succinate dehydrogenase iron-sulfur protein
A3-18-all-fractions_k255_1277273_14

Not on your lists

15325..15591
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJ17_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96448.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
A3-18-all-fractions_k255_1277273_15

Not on your lists

15643..16956
DNA (1314bp) protein (438aa)
Citrate synthase {ECO:0000313|EMBL:EFK96447.1}; EC=2.3.3.1 {ECO:0000313|EMBL:EFK96447.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=sediment metagenome RepID=D9PJ16_9ZZZZ
A3-18-all-fractions_k255_1277273_16
unknown

Not on your lists

17217..17705
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E8E50
A3-18-all-fractions_k255_1277273_17
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17695..19140
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B390B
Protease-like protein {ECO:0000313|EMBL:ELX09074.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
PA domain protein
A3-18-all-fractions_k255_1277273_18
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19267..19824
DNA (558bp) protein (186aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
isopropylmalate isomerase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003620813
Displaying 18 items

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