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A3-18-all-fractions_k255_1425352

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_1425352_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26..1447)
DNA (1422bp) protein (474aa)
TRAP-type mannitol/chloroaromatic compound transport system, large permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CTC5_9BURK
TRAP-type mannitol/chloroaromatic compound transport system, large permease component {ECO:0000313|EMBL:EJL78084.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
TRAP dicarboxylate transporter subunit DctM
A3-18-all-fractions_k255_1425352_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1444..1911)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P106_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74335.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
A3-18-all-fractions_k255_1425352_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1955..2881
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5A6_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB33494.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_1425352_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2898..3680
DNA (783bp) protein (261aa)
3-oxoacyl-ACP reductase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D31B0
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAL95516.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_1425352_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3686..4177
DNA (492bp) protein (164aa)
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1T1_DELSC
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EZP55470.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
AraC family transcriptional regulator
A3-18-all-fractions_k255_1425352_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..4581
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZS7_VARPS
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACS22327.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-18-all-fractions_k255_1425352_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4596..4988
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AG52_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH87452.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
A3-18-all-fractions_k255_1425352_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5007..5918)
DNA (912bp) protein (304aa)
Permeases of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKB5_METPP
DMT family permease
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:ABM96004.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_1425352_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5915..6220)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKB4_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96003.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_1425352_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6301..7293
DNA (993bp) protein (331aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS09_9BURK
alcohol dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_1425352_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7290..9404)
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DD6DD0
Uncharacterized protein {ECO:0000313|EMBL:KIF83150.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
A3-18-all-fractions_k255_1425352_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9637..11898
DNA (2262bp) protein (754aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI15_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:EHR70889.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
peptidase S8 and S53 subtilisin kexin sedolisin
A3-18-all-fractions_k255_1425352_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11895..14456
DNA (2562bp) protein (854aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI14_9BURK
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHR70888.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
A3-18-all-fractions_k255_1425352_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14485..14931)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXU7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97834.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_1425352_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15051..15551)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Lipoprotein signal peptidase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXF6_RAMTT
lspA; Signal peptidase II
A3-18-all-fractions_k255_1425352_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15548..18412)
DNA (2865bp) protein (955aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKB0_METPP
A3-18-all-fractions_k255_1425352_17
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18625..19581)
DNA (957bp) protein (319aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
putative riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
riboflavin kinase n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D5F93
A3-18-all-fractions_k255_1425352_18
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19589..21409)
DNA (1821bp) protein (607aa)
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQU4_ACCPU
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_1425352_19
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21510..22220)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Pseudouridine synthase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYK0_LEPCP
pseudouridine synthase
A3-18-all-fractions_k255_1425352_20
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22217..23635)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ50_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
A3-18-all-fractions_k255_1425352_21
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23670..24665)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y136_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92254.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_1425352_22
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24677..25816)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000369B12E
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL89673.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
acyl-CoA dehydrogenase-like protein
A3-18-all-fractions_k255_1425352_23
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25820..27001)
DNA (1182bp) protein (394aa)
acyl-CoA dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036AD9D5
acyl-CoA dehydrogenase-like protein
Tax=GWA2_Curvibacter_64_110_curated
A3-18-all-fractions_k255_1425352_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27096..27728)
DNA (633bp) protein (211aa)
Predicted peptidase aspartic family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKA4_METPP
peptidase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
A3-18-all-fractions_k255_1425352_25
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27734..28222)
DNA (489bp) protein (163aa)
UPF0234 protein Mpe_A3039 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=Y3039_METPP
hypothetical protein
UPF0234 protein Mpe_A3039 {ECO:0000255|HAMAP-Rule:MF_00632}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_1425352_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28266..29282
DNA (1017bp) protein (339aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
murB; UDP-N-acetylmuramate dehydrogenase MurB (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Caldimonas manganoxidans RepID=UPI00035E8685
A3-18-all-fractions_k255_1425352_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29279..31534)
DNA (2256bp) protein (752aa)
sensor protein (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPV5_9BURK
Signal transduction histidine kinase {ECO:0000313|EMBL:EHR72653.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_1425352_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31531..32043)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUH1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11989.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_1425352_29
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32087..32758)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036F80CD
Lysine transporter LysE {ECO:0000313|EMBL:KAK47760.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
lysine exporter protein LysE/YggA family
A3-18-all-fractions_k255_1425352_30
unknown

Not on your lists

comp(32876..33061)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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