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A3-18-all-fractions_k255_2125153

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_2125153_1
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D0A08
ATP-dependent DNA helicase recq
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_2125153_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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831..1310
DNA (480bp) protein (160aa)
Single-stranded DNA-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKW5_9BURK
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
single-strand binding protein
A3-18-all-fractions_k255_2125153_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1397..4186
DNA (2790bp) protein (930aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SKB2_PLABD
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ADY60869.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
A3-18-all-fractions_k255_2125153_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4197..6692)
DNA (2496bp) protein (832aa)
putative hybrid sensor and regulator protein (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRN1_9BURK
Signal transduction histidine kinase {ECO:0000313|EMBL:EHR72811.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_2125153_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6719..7795)
DNA (1077bp) protein (359aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRN2_9BURK
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EHR72812.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TRAP dicarboxylate transporter subunit DctP
A3-18-all-fractions_k255_2125153_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7912..8514
DNA (603bp) protein (201aa)
Uncharacterized protein with SCP/PR1 domains n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTN3_9BURK
Uncharacterized protein with SCP/PR1 domains {ECO:0000313|EMBL:EHR69106.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_2125153_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8477..9607)
DNA (1131bp) protein (377aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
thiouridylase n=1 Tax=Caldimonas manganoxidans RepID=UPI00037E4B5A
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
A3-18-all-fractions_k255_2125153_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9635..10072)
DNA (438bp) protein (146aa)
Phenylacetic acid degradation-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4C8_9BURK
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:AFU43786.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
A3-18-all-fractions_k255_2125153_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10069..10482)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E96822
MerR family transcriptional regulator {ECO:0000313|EMBL:KGG85991.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
transcriptional regulator, MerR family
A3-18-all-fractions_k255_2125153_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10526..11062)
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=1274562 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
NUDIX hydrolase
Tax=BJP_08E140C01_Burkholderiales_65_30
A3-18-all-fractions_k255_2125153_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11237..12352
DNA (1116bp) protein (372aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Comamonas sp. 7D-2 RepID=M9UWW0_9BURK
pntA; NAD(P) transhydrogenase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_2125153_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12355..12690
DNA (336bp) protein (112aa)
NAD(P) transhydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034862A4
NAD(P) transhydrogenase subunit alpha part 2
Uncharacterized protein {ECO:0000313|EMBL:KFJ13643.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
A3-18-all-fractions_k255_2125153_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12687..14111
DNA (1425bp) protein (475aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX54_LEPCP
A3-18-all-fractions_k255_2125153_14
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14136..15668)
DNA (1533bp) protein (511aa)
SAF domain protein {ECO:0000313|EMBL:EFF73153.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EFF73153.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
SAF domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XJ36_9BURK
UxaA family hydrolase
A3-18-all-fractions_k255_2125153_15
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..16539)
DNA (861bp) protein (287aa)
ureidoglycolate lyase (EC:4.3.2.3)
Ureidoglycolate lyase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F8N0_9BURK
Ureidoglycolate lyase {ECO:0000313|EMBL:EHK65344.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
A3-18-all-fractions_k255_2125153_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16559..17317)
DNA (759bp) protein (253aa)
oxidoreductase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000317C0D6
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:CAP44290.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
A3-18-all-fractions_k255_2125153_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17314..18075)
DNA (762bp) protein (254aa)
Transcriptional regulator, GntR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I6E0_BORPD
Transcriptional regulator, GntR family
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24565.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
A3-18-all-fractions_k255_2125153_18
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18266..19939
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EWS53976.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EWS53976.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Putative long-chain-fatty-acid--CoA ligase protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLT6_METPP
A3-18-all-fractions_k255_2125153_19
unknown

Not on your lists

20039..20479
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Ralstonia RepID=C6BHT3_RALP1
hypothetical protein
A3-18-all-fractions_k255_2125153_20
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20493..20858
DNA (366bp) protein (122aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
Adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:ACB32697.1}; EC=3.2.2.9 {ECO:0000313|EMBL:ACB32697.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Adenosylhomocysteine nucleosidase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX51_LEPCP
Displaying 20 items

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