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A3-18-all-fractions_k255_3052911

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3052911_1
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..819)
DNA (819bp) protein (273aa)
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Pyruvate dehydrogenase E1 component n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXD2_LEPCP
A3-18-all-fractions_k255_3052911_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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984..3530
DNA (2547bp) protein (849aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003829640
A3-18-all-fractions_k255_3052911_3
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3527..4150
DNA (624bp) protein (208aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHP7_METPP
LuxR family transcriptional regulator
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EWS58703.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_3052911_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4213..5070
DNA (858bp) protein (286aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLS3_9BURK
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_3052911_5
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5097..7136
DNA (2040bp) protein (680aa)
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A n=1 Tax=Caldimonas manganoxidans RepID=UPI000377349B
Oligopeptidase A {ECO:0000313|EMBL:KDB53596.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
A3-18-all-fractions_k255_3052911_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7181..7807
DNA (627bp) protein (209aa)
Glutaredoxin-like protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRR4_RUBGI
glutaredoxin-like protein
Glutaredoxin-like protein {ECO:0000313|EMBL:BAL95701.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_3052911_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7815..9002)
DNA (1188bp) protein (396aa)
Putative inner membrane efflux protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFY8_METPP
inner membrane efflux protein
Putative inner membrane efflux protein {ECO:0000313|EMBL:ABM94477.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_3052911_8
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8999..10306)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFY7_METPP
hypothetical protein
DNA recombination protein RmuC {ECO:0000313|EMBL:EWS59299.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_3052911_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10337..11824)
DNA (1488bp) protein (496aa)
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV79_9BURK
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system {ECO:0000313|EMBL:EHR72286.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ABC transporter permease
A3-18-all-fractions_k255_3052911_10
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11830..12822)
DNA (993bp) protein (331aa)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000313|EMBL:EWS59302.1}; EC=1.1.1.79 {ECO:0000313|EMBL:EWS59302.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
2-hydroxyacid dehydrogenase (EC:1.1.1.215)
2-hydroxyacid dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI00035E5D18
A3-18-all-fractions_k255_3052911_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12819..14066)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TYL3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL83922.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
A3-18-all-fractions_k255_3052911_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14116..14814)
DNA (699bp) protein (233aa)
Nitroreductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X560_THIK1
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ADG29884.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
A3-18-all-fractions_k255_3052911_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14811..15245)
DNA (435bp) protein (145aa)
Thioesterase superfamily protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ7_RUBGI
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:BAL95694.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_3052911_14

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comp(15214..16179)
DNA (966bp) protein (322aa)
Histone deacetylase superfamily protein n=1 Tax=sediment metagenome RepID=D9PM09_9ZZZZ
hypothetical protein
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EFK95408.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
A3-18-all-fractions_k255_3052911_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16349..16900
DNA (552bp) protein (184aa)
Phasin family protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLR1_9BURK
Phasin family protein {ECO:0000313|EMBL:EHR71053.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_3052911_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17123..18073)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95688.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_3052911_17
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18196..19896
DNA (1701bp) protein (567aa)
Putative nitrite/sulfite reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFX6_METPP
nitrite/sulfite reductase
Putative nitrite/sulfite reductase {ECO:0000313|EMBL:ABM94465.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_3052911_18
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19907..20443
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFX5_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS60223.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
A3-18-all-fractions_k255_3052911_19
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20440..21186
DNA (747bp) protein (249aa)
adenylylsulfate reductase (EC:1.8.4.8)
Adenylylsulfate reductase, thioredoxin dependent {ECO:0000313|EMBL:ACB35051.1}; EC=1.8.4.8 {ECO:0000313|EMBL:ACB35051.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Adenylylsulfate reductase, thioredoxin dependent n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWQ0_LEPCP
A3-18-all-fractions_k255_3052911_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21183..21599
DNA (417bp) protein (139aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
sulfate adenylyltransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003640345
PAPS reductase/FAD synthetase family protein {ECO:0000313|EMBL:EHR71047.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Displaying 20 items

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