ggKbase home page

A3-18-all-fractions_k255_3771248

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3771248_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23..301)
DNA (279bp) protein (93aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTF6_COMTE
UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
A3-18-all-fractions_k255_3771248_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301..2091)
DNA (1791bp) protein (597aa)
peptidoglycan synthetase FtsI (EC:2.4.1.129)
Peptidoglycan synthetase FtsI {ECO:0000313|EMBL:ABM93418.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABM93418.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037F1C05
A3-18-all-fractions_k255_3771248_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2088..2384)
DNA (297bp) protein (99aa)
Cell division protein FtsL n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUG7_9BURK
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
ftsL; cell division protein
A3-18-all-fractions_k255_3771248_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2381..3328)
DNA (948bp) protein (316aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000255|HAMAP-Rule:MF_01007}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RSMH_METPP
A3-18-all-fractions_k255_3771248_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3336..3743)
DNA (408bp) protein (136aa)
MraZ family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI00036B3B16
mraZ; uncharacterized protein conserved in bacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_3771248_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4124..4540
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLX2_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71458.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_3771248_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4537..5232
DNA (696bp) protein (232aa)
RES domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLX1_9BURK
RES domain-containing protein {ECO:0000313|EMBL:EHR71457.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_3771248_8
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5409..6194
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CS41_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
A3-18-all-fractions_k255_3771248_9
unknown

Not on your lists

6266..6829
DNA (564bp) protein (188aa)
hypothetical protein
A3-18-all-fractions_k255_3771248_10
unknown

Not on your lists

7085..7309
DNA (225bp) protein (75aa)

This feature has no annotations

A3-18-all-fractions_k255_3771248_11
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7328..8398
DNA (1071bp) protein (357aa)
Membrane protein, putative n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBR9_METPP
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABM93008.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_3771248_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8313..9200)
DNA (888bp) protein (296aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E2N2_9BURK
murQ; N-acetylmuramic acid 6-phosphate etherase
A3-18-all-fractions_k255_3771248_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9276..9692)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4F6_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93803.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_3771248_14
unknown

Not on your lists

comp(9864..10082)
DNA (219bp) protein (73aa)

This feature has no annotations

A3-18-all-fractions_k255_3771248_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10230..10901
DNA (672bp) protein (224aa)
LuxR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A9D
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
A3-18-all-fractions_k255_3771248_16
unknown

Not on your lists

11012..11326
DNA (315bp) protein (105aa)

This feature has no annotations

A3-18-all-fractions_k255_3771248_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11406..12311
DNA (906bp) protein (302aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7V7_VARPE
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU37218.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-18-all-fractions_k255_3771248_18
unknown

Not on your lists

comp(12308..12394)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 18 items

View Taxonomy