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A3-18-all-fractions_k255_3840551

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3840551_1
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..633
DNA (633bp) protein (211aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BB389
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_3840551_2
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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630..1130
DNA (501bp) protein (167aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR84_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_3840551_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1362..1910
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6D1_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL94386.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
A3-18-all-fractions_k255_3840551_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1933..3261)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein (EC:2.7.3.-)
Putative oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG46_METPP
A3-18-all-fractions_k255_3840551_5
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3361..4095)
DNA (735bp) protein (245aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK38_9BURK
ompR; DNA-binding response regulator OmpR
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_3840551_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4267..4977
DNA (711bp) protein (237aa)
Putative periplasmic/secreted protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK39_9BURK
Putative periplasmic/secreted protein {ECO:0000313|EMBL:EHR71354.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_3840551_7
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5013..5783)
DNA (771bp) protein (257aa)
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EWS58045.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EWS58045.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
D-beta-hydroxybutyrate dehydrogenase (BDH) oxidoreductase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036E7278
A3-18-all-fractions_k255_3840551_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5838..6704
DNA (867bp) protein (289aa)
alpha/beta hydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B4F8B8
hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_3840551_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6701..8971
DNA (2271bp) protein (757aa)
GTP diphosphokinase (EC:2.7.6.5)
GTP diphosphokinase {ECO:0000313|EMBL:ABM94540.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ABM94540.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
GTP diphosphokinase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG51_METPP
A3-18-all-fractions_k255_3840551_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9558)
DNA (534bp) protein (178aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI000301EBBF
Uncharacterized protein {ECO:0000313|EMBL:KJA11315.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
putative integrase
A3-18-all-fractions_k255_3840551_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9513..10337)
DNA (825bp) protein (275aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI000301EBBF
Uncharacterized protein {ECO:0000313|EMBL:KJA11315.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
integrase
A3-18-all-fractions_k255_3840551_12
Bordetella phage BPP-1, Bppunalikevirus, Caudovirales, Viruses

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comp(10313..10537)
DNA (225bp) protein (75aa)
excisionase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0003663745
Bbp49 {ECO:0000313|EMBL:AAR97714.1}; TaxID=194699 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Bordetella phage BPP-1.;"
Putative phage excisionase Bbp49
A3-18-all-fractions_k255_3840551_13
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10887..11282
DNA (396bp) protein (132aa)
DNA repair protein radc n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK31_9BURK
DNA repair protein RadC {ECO:0000313|EMBL:EWS62110.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
Displaying 13 items

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