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A3-18-all-fractions_k255_5424687

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5424687_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..934
DNA (933bp) protein (311aa)
Tyrosine recombinase XerD n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRZ3_9BURK
tyrosine recombinase XerD subunit
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_5424687_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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999..1865
DNA (867bp) protein (289aa)
Metallophosphoesterase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6C6_VARPE
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADU39435.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-18-all-fractions_k255_5424687_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1862..2917
DNA (1056bp) protein (352aa)
glycosyltransferase (EC:2.4.1.-)
Putative glycosyltransferase {ECO:0000313|EMBL:ABM95964.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABM95964.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Putative glycosyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK75_METPP
A3-18-all-fractions_k255_5424687_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2914..4995
DNA (2082bp) protein (694aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036A3168
A3-18-all-fractions_k255_5424687_5
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5003..5464
DNA (462bp) protein (154aa)
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EWS54440.1}; EC=3.1.3.- {ECO:0000313|EMBL:EWS54440.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037A563E
phosphohistidine phosphatase, SixA
A3-18-all-fractions_k255_5424687_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5490..7031)
DNA (1542bp) protein (514aa)
Ppx/GppA phosphatase (EC:3.6.1.11)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003708D7A
Exopolyphosphatase {ECO:0000313|EMBL:EHR73596.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_5424687_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7101..7973
DNA (873bp) protein (291aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ABM95958.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ABM95958.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Carboxymethylenebutenolidase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK69_METPP
A3-18-all-fractions_k255_5424687_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8001..8435)
DNA (435bp) protein (145aa)
Universal stress protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKB7_9BURK
UspA domain-containing protein {ECO:0000313|EMBL:EGJ08785.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
UspA domain-containing protein
A3-18-all-fractions_k255_5424687_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8534..9379)
DNA (846bp) protein (282aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.1)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ51_METPP
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_5424687_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9384..10274)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036ED0C0
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ACB35626.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_5424687_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10297..11460)
DNA (1164bp) protein (388aa)
Rieske (2Fe-2S) protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036F1CF2
Ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:EHR73608.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative dioxygenase (alpha subunit), oxidoreductase protein
A3-18-all-fractions_k255_5424687_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11685..11927
DNA (243bp) protein (81aa)
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036B294C
A3-18-all-fractions_k255_5424687_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11924..12811
DNA (888bp) protein (296aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABM95586.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABM95586.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Farnesyl-diphosphate synthase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ47_METPP
A3-18-all-fractions_k255_5424687_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12820..14739
DNA (1920bp) protein (640aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Caldimonas manganoxidans RepID=UPI000370F111
A3-18-all-fractions_k255_5424687_15
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14841..15638
DNA (798bp) protein (266aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
GTP cyclohydrolase FolE2 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT76_9BURK
hypothetical protein
A3-18-all-fractions_k255_5424687_16
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15643..17169)
DNA (1527bp) protein (509aa)
fumarase (EC:4.2.1.2)
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EWS62169.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EWS62169.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Fumarase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFK5_METPP
A3-18-all-fractions_k255_5424687_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17354..19150
DNA (1797bp) protein (599aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
acetyl-CoA synthetase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036AF3E8
acetate/CoA ligase
Displaying 17 items

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