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A3-18-all-fractions_k255_7169176

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7169176_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..339
DNA (339bp) protein (113aa)
Putative Trypsin-like serine protease n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQX2_THIA3
putative Trypsin-like serine protease
Putative Trypsin-like serine protease {ECO:0000313|EMBL:CAZ87013.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
A3-18-all-fractions_k255_7169176_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(287..2242)
DNA (1956bp) protein (652aa)
RNA polymerase sigma factor RpoD n=1 Tax=Caldimonas manganoxidans RepID=UPI00038256D7
rpoD; RNA polymerase primary sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7169176_3
unknown

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comp(2343..2546)
DNA (204bp) protein (68aa)

This feature has no annotations

A3-18-all-fractions_k255_7169176_4
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2665..3546)
DNA (882bp) protein (294aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2TFS7_9BURK
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL77227.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ABC transporter permease
A3-18-all-fractions_k255_7169176_5
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3548..4495)
DNA (948bp) protein (316aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2KW43_9BURK
yliC; ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-18-all-fractions_k255_7169176_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4502..6016)
DNA (1515bp) protein (505aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J3CRU3_9BURK
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL77229.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ABC transporter substrate-binding protein
A3-18-all-fractions_k255_7169176_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6034..7071)
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KAF6_9BURK
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJL77230.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ABC transporter ATP-binding protein
A3-18-all-fractions_k255_7169176_8
bacterium YEK0313, Bacteria

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comp(7080..8069)
DNA (990bp) protein (330aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CSC1_9BURK
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ15076.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein
A3-18-all-fractions_k255_7169176_9
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8071..8787)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TFT2_9BURK
pilus assembly protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A3-18-all-fractions_k255_7169176_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8879..10147
DNA (1269bp) protein (423aa)
Peptidase M16 domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y3F4_LEPCP
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACB34482.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7169176_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10173..11198)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034991B2
Uncharacterized protein {ECO:0000313|EMBL:KHA63128.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
A3-18-all-fractions_k255_7169176_12
unknown

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comp(11195..11593)
DNA (399bp) protein (133aa)

This feature has no annotations

A3-18-all-fractions_k255_7169176_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11695..13881
DNA (2187bp) protein (729aa)
prolyl endopeptidase (EC:3.4.21.26)
Protease II n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKW6_9BURK
Protease II {ECO:0000313|EMBL:EHR73709.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_7169176_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13936..15075
DNA (1140bp) protein (380aa)
Secretion protein HlyD family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR88_RUBGI
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAL95525.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7169176_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15079..18288
DNA (3210bp) protein (1070aa)
Transporter, AcrB/D/F family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR87_RUBGI
Transporter, AcrB/D/F family protein {ECO:0000313|EMBL:BAL95524.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
transporter, AcrB/D/F family protein
A3-18-all-fractions_k255_7169176_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18314..18823)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSU0_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24581.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
A3-18-all-fractions_k255_7169176_17
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18847..19212)
DNA (366bp) protein (122aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKS1_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDS50977.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
A3-18-all-fractions_k255_7169176_18
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19333..20883
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000382A554
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIM93813.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
A3-18-all-fractions_k255_7169176_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20920..22731
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035FC214
Uncharacterized protein {ECO:0000313|EMBL:KFC73714.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
conserved hypothetical protein
A3-18-all-fractions_k255_7169176_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22839..24173)
DNA (1335bp) protein (445aa)
C4-dicarboxylate transport protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNC1_9BURK
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dctA; C4-dicarboxylate transporter DctA
A3-18-all-fractions_k255_7169176_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24270..24680
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37079.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
A3-18-all-fractions_k255_7169176_22
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24819..25553
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036292B5
transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
A3-18-all-fractions_k255_7169176_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25538..26128)
DNA (591bp) protein (197aa)
Hemerythrin HHE cation-binding domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HML7_9BURK
hemerythrin HHE cation-binding domain-containing protein
Hemerythrin HHE cation-binding domain-containing protein {ECO:0000313|EMBL:AFU44203.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
A3-18-all-fractions_k255_7169176_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26270..27901
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037E5ED9
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJE49230.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
A3-18-all-fractions_k255_7169176_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27906..29405)
DNA (1500bp) protein (500aa)
Putative serine/threonine protein kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNS9_RUBGI
putative serine/threonine protein kinase
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAL94666.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7169176_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29395..30138)
DNA (744bp) protein (248aa)
metallophosphoesterase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B61FC8
putative metallophosphoesterase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7169176_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30161..30721)
DNA (561bp) protein (187aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM41_9BURK
Displaying 27 items

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