ggKbase home page

A3-18-all-fractions_k255_7214020

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7214020_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..701)
DNA (699bp) protein (233aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM41_9BURK
A3-18-all-fractions_k255_7214020_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(698..1915)
DNA (1218bp) protein (406aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Acetylornithine aminotransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK93_METPP
A3-18-all-fractions_k255_7214020_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2146..2481
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM39_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71924.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_7214020_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2530..2829)
DNA (300bp) protein (100aa)
30S ribosomal protein S20 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM38_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rpsT; 30S ribosomal protein S20
A3-18-all-fractions_k255_7214020_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3015..4589
DNA (1575bp) protein (525aa)
Integral membrane protein MviN n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR31_9BURK
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mviN; integral membrane protein MviN
A3-18-all-fractions_k255_7214020_6
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4600..5481
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK88_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95977.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_7214020_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5606..6670
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0G6_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB32947.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7214020_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6667..7338
DNA (672bp) protein (224aa)
DnaA-homolog protein Hda n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU2_RUBGI
hda; DnaA-like protein Hda
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7214020_9
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7335..8012
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000375AEA3
HAD family hydrolase {ECO:0000313|EMBL:KDB53344.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
A3-18-all-fractions_k255_7214020_10
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8009..9523
DNA (1515bp) protein (505aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
polynucleotide adenylyltransferase (EC:2.7.7.19)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003695400
A3-18-all-fractions_k255_7214020_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9520..10713
DNA (1194bp) protein (398aa)
Beta-lactamase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE0_RHOFD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABD69913.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_7214020_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10741..11235
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EWS53701.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EWS53701.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK83_METPP
A3-18-all-fractions_k255_7214020_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11232..11585
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM30_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71915.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_7214020_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11638..12285
DNA (648bp) protein (216aa)
Phosphate transport regulator related to PhoU n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM29_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7214020_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12349..13362
DNA (1014bp) protein (338aa)
Phosphate/sulfate permease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM28_9BURK
Phosphate/sulfate permease {ECO:0000313|EMBL:EHR71913.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phosphate transporter
A3-18-all-fractions_k255_7214020_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13369..13803)
DNA (435bp) protein (145aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SES4_METPP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_7214020_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13800..14342)
DNA (543bp) protein (181aa)
phosphinothricin acetyltransferase (EC:2.3.1.-)
Putative phosphinothricin acetyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SES5_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7214020_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14512..14760
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN30_9BURK
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_7214020_19
Leptothrix ochracea, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14780..15388
DNA (609bp) protein (203aa)
Ribosome maturation factor RimM n=1 Tax=Leptothrix ochracea L12 RepID=I4Z553_9BURK
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=735332 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix ochracea L12.;"
rimM; 16S rRNA-processing protein RimM
A3-18-all-fractions_k255_7214020_20
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15405..16157
DNA (753bp) protein (251aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=TRMD_LEPCP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7214020_21
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16269..16622
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RL19_METPP
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
A3-18-all-fractions_k255_7214020_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16719..17396
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036588B2
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADU98968.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
A3-18-all-fractions_k255_7214020_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17436..18425
DNA (990bp) protein (330aa)
cbiB; cobalamin biosynthesis protein CbiB (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV6_RUBGI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7214020_24
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18445..19371)
DNA (927bp) protein (309aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
ATP/GTP-binding protein (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJX8_METPP
A3-18-all-fractions_k255_7214020_25
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19361..19690)
DNA (330bp) protein (110aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000365BD27
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
A3-18-all-fractions_k255_7214020_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19695..20975)
DNA (1281bp) protein (427aa)
Zn-dependent protease with chaperone function n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM19_9BURK
Ste24 endopeptidase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7214020_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21064..21624
DNA (561bp) protein (187aa)
orn; oligoribonuclease Orn (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Oligoribonuclease n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV9_RUBGI
A3-18-all-fractions_k255_7214020_28
unknown

Not on your lists

21714..21965
DNA (252bp) protein (84aa)

This feature has no annotations

A3-18-all-fractions_k255_7214020_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22223..23500
DNA (1278bp) protein (426aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:BAL94700.1}; EC=3.6.4.13 {ECO:0000313|EMBL:BAL94700.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP-dependent RNA helicase RhlE n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW3_RUBGI
A3-18-all-fractions_k255_7214020_30
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23590..23913)
DNA (324bp) protein (108aa)
Transport-associated n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RA1_RHOFD
transport protein
Transport-associated {ECO:0000313|EMBL:ABD71702.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Displaying items 1-30 of 43 in total

View Taxonomy