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A3-18-all-fractions_k255_7387893

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7387893_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

A3-18-all-fractions_k255_7387893_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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85..609
DNA (525bp) protein (175aa)
Urease accessory protein UreE n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAT9_ACIAP
UreE urease accessory domain-containing protein
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
A3-18-all-fractions_k255_7387893_3
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

606..1283
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037F239D
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
urease accessory protein UreF
A3-18-all-fractions_k255_7387893_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1283..1957
DNA (675bp) protein (225aa)
Urease accessory protein UreG n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWM5_RUBGI
ureG; urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7387893_5
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1935..2903)
DNA (969bp) protein (323aa)
Putative metal ion transport protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIS0_METPP
metal ion transport protein
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
A3-18-all-fractions_k255_7387893_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2963..3997)
DNA (1035bp) protein (345aa)
Putative S49 family peptidase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWN6_RUBGI
putative S49 family peptidase
Putative S49 family peptidase {ECO:0000313|EMBL:BAL97423.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7387893_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4028..4414)
DNA (387bp) protein (129aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS88_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7387893_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4407..5072)
DNA (666bp) protein (222aa)
haloacid dehalogenase (EC:3.1.3.18)
Haloacid dehalogenase-like hydrolase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDI1_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7387893_9
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..6091)
DNA (1023bp) protein (341aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS90_9BURK
A3-18-all-fractions_k255_7387893_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..9687
DNA (3024bp) protein (1008aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ribonuclease E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS91_9BURK
A3-18-all-fractions_k255_7387893_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9724..10773)
DNA (1050bp) protein (350aa)
glycosyl hydrolase (EC:3.2.1.52)
beta-hexosaminidase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036C17E2
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7387893_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10775..11179)
DNA (405bp) protein (135aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
acpS; holo-[acyl-carrier-protein] synthase AcpS (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNE7_9BURK
A3-18-all-fractions_k255_7387893_13
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11176..11982)
DNA (807bp) protein (269aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS96_9BURK
pyridoxine 5'-phosphate synthase
A3-18-all-fractions_k255_7387893_14
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11979..12767)
DNA (789bp) protein (263aa)
DNA repair protein RecO n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034687A0
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
DNA replication and repair protein RecO
A3-18-all-fractions_k255_7387893_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12767..13639)
DNA (873bp) protein (291aa)
GTPase Era n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWP7_RUBGI
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7387893_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13711..14415)
DNA (705bp) protein (235aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWP8_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7387893_17
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14433..14807)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDH2_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS54913.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
A3-18-all-fractions_k255_7387893_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14849..15814)
DNA (966bp) protein (322aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Signal peptidase I n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWQ0_RUBGI
A3-18-all-fractions_k255_7387893_19
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15814..17622)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Elongation factor 4 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=LEPA_METPP
GTP-binding protein LepA
A3-18-all-fractions_k255_7387893_20
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18132..19616)
DNA (1485bp) protein (495aa)
peptidase (EC:3.4.21.-)
Putative periplasmic serine endoprotease DegP-like {ECO:0000313|EMBL:EWS54916.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EWS54916.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Subfamily S1C unassigned peptidase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDG8_METPP
A3-18-all-fractions_k255_7387893_21
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19704..20717)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000382ADEC
Sigma factor AlgU regulatory protein MucB {ECO:0000313|EMBL:EWS54917.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
sigma E regulatory protein, MucB/RseB
A3-18-all-fractions_k255_7387893_22
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20723..21373)
DNA (651bp) protein (217aa)
Putative transmembrane sigma-E factor negative regulatory transcription regulator protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDG6_METPP
transmembrane sigma-E factor negative regulatory transcription regulator protein
Uncharacterized protein {ECO:0000313|EMBL:EWS54918.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
A3-18-all-fractions_k255_7387893_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21408..22016)
DNA (609bp) protein (203aa)
RNA polymerase sigma factor RpoE n=1 Tax=Caldimonas manganoxidans RepID=UPI000380D0F2
ECF subfamily RNA polymerase sigma-70 factor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7387893_24
unknown

Not on your lists

comp(22013..22513)
DNA (501bp) protein (167aa)

This feature has no annotations

A3-18-all-fractions_k255_7387893_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22534..23781)
DNA (1248bp) protein (416aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
3-oxoacyl-ACP synthase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003711C11
A3-18-all-fractions_k255_7387893_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23799..24038)
DNA (240bp) protein (80aa)
Acyl carrier protein n=2 Tax=Rubrivivax RepID=I0HWQ9_RUBGI
acpP; acyl carrier protein AcpP
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_7387893_27
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24155..24898)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABM93600.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABM93600.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDG1_METPP
A3-18-all-fractions_k255_7387893_28
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24895..25833)
DNA (939bp) protein (313aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
malonyl CoA-ACP transacylase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003790F9D
malonyl CoA-acyl carrier protein transacylase
A3-18-all-fractions_k255_7387893_29
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25868..26848)
DNA (981bp) protein (327aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDF9_METPP
A3-18-all-fractions_k255_7387893_30
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26854..27957)
DNA (1104bp) protein (368aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
phosphate acyltransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003697EDD
glycerol-3-phosphate acyltransferase PlsX
Displaying items 1-30 of 35 in total

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