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A3-18-all-fractions_k255_7427920

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7427920_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..750)
DNA (750bp) protein (250aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
phenylacetate-CoA ligase (EC:6.2.1.30)
phenylacetate-CoA ligase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003745337
A3-18-all-fractions_k255_7427920_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(747..1202)
DNA (456bp) protein (152aa)
phenylacetic acid degradation protein n=1 Tax=Variovorax paradoxus RepID=UPI00037FFE89
phenylacetic acid degradation protein PaaD
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:ACS17888.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-18-all-fractions_k255_7427920_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1210..2010)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036817A5
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJE53549.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
enoyL-CoA hydratase/isomerase
A3-18-all-fractions_k255_7427920_4
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2117..2716
DNA (600bp) protein (200aa)
Phenylacetic acid degradation protein PaaY n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4V8_LEPCP
phenylacetic acid degradation protein PaaY
Phenylacetic acid degradation protein PaaY {ECO:0000313|EMBL:ACB34671.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7427920_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2730..3416)
DNA (687bp) protein (229aa)
cbbE; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B7AA3E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_7427920_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3443..3826
DNA (384bp) protein (128aa)
Protein ApaG n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7K6_LEPCP
ApaG domain-containing protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7427920_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3972..5141
DNA (1170bp) protein (390aa)
Putative membrane-bound lytic murein transglycosylase A n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKU5_RUBGI
mltA; putative membrane-bound lytic murein transglycosylase A
Putative membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:BAL93632.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7427920_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..6461)
DNA (1320bp) protein (440aa)
iron transporter n=1 Tax=Variovorax paradoxus RepID=UPI000360EF57
Variovorax paradoxus strain MEDvA23 contig_110, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19092.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
natural resistance-associated macrophage protein
A3-18-all-fractions_k255_7427920_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6508..7047)
DNA (540bp) protein (180aa)
Transcriptional regulator, AsnC family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLL5_METPP
AsnC family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7427920_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7174..10716
DNA (3543bp) protein (1181aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:AFU48302.1}; EC=1.2.7.8 {ECO:0000313|EMBL:AFU48302.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I513_9BURK
A3-18-all-fractions_k255_7427920_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10717..12207)
DNA (1491bp) protein (497aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000255|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000255|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000255|HAMAP-Rule:MF_00229};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Histidine ammonia-lyase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=HUTH_RHOCS
A3-18-all-fractions_k255_7427920_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12275..13015
DNA (741bp) protein (247aa)
Transcriptional regulator, histidine utilization repressor, GntR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EC6_POLSJ
histidine utilization repressor
Transcriptional regulator, histidine utilization repressor, GntR family {ECO:0000313|EMBL:ABE43116.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_7427920_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13075..13812
DNA (738bp) protein (246aa)
YecA family protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2J9_LEPCP
yecA family protein
YecA family protein {ECO:0000313|EMBL:ACB33215.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7427920_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14593
DNA (771bp) protein (257aa)
Calcineurin-like phosphoesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ8_9BURK
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EGJ09716.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
calcineurin-like phosphoesterase
A3-18-all-fractions_k255_7427920_15
unknown

Not on your lists

comp(14601..14810)
DNA (210bp) protein (70aa)

This feature has no annotations

A3-18-all-fractions_k255_7427920_16
unknown

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15055..15279
DNA (225bp) protein (75aa)

This feature has no annotations

A3-18-all-fractions_k255_7427920_17
Hydrogenophaga sp. PL2G6, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15289..15771)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y347_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:ACB13023.1}; TaxID=503997 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PL2G6.;"
hypothetical protein
A3-18-all-fractions_k255_7427920_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15889..16641)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KMA0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54750.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
A3-18-all-fractions_k255_7427920_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16638..17210)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Acidovorax sp. CF316 RepID=J1ERI0_9BURK
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJE54749.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RNA polymerase sigma factor, sigma-70 family protein
A3-18-all-fractions_k255_7427920_20
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17309..18595
DNA (1287bp) protein (429aa)
Putative chaperone protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHX0_METPP
chaperone protein
Putative chaperone protein {ECO:0000313|EMBL:ABM95159.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_7427920_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18600..19244)
DNA (645bp) protein (215aa)
YecA family protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN03_9BURK
YecA family protein {ECO:0000313|EMBL:EGJ09721.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
yecA family protein
A3-18-all-fractions_k255_7427920_22
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19602..20540)
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLN7_METPP
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM96476.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_7427920_23
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20683..22203
DNA (1521bp) protein (507aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase [acylating] {ECO:0000313|EMBL:EWS58633.1}; EC=1.2.1.27 {ECO:0000313|EMBL:EWS58633.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLN8_METPP
A3-18-all-fractions_k255_7427920_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22354..23988
DNA (1635bp) protein (545aa)
Diguanylate cyclase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKC4_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL93461.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7427920_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24081..25865
DNA (1785bp) protein (595aa)
Glycoside hydrolase family 2, sugar binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7N6_NITMU
Glycoside hydrolase family 2, sugar binding protein {ECO:0000313|EMBL:ABB75235.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
glycoside hydrolase family protein
A3-18-all-fractions_k255_7427920_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25865..26950
DNA (1086bp) protein (362aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7N7_NITMU
A3-18-all-fractions_k255_7427920_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26947..27990
DNA (1044bp) protein (348aa)
Galactokinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7N8_NITMU
galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
A3-18-all-fractions_k255_7427920_28
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27998..30199)
DNA (2202bp) protein (734aa)
Candidate b-glycosidase, Glycoside Hydrolase Family 1 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVK5_RAMTT
Candidate b-glycosidase, Glycoside Hydrolase Family 1 {ECO:0000313|EMBL:AEG91581.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
b-glycosidase
A3-18-all-fractions_k255_7427920_29
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30196..31425)
DNA (1230bp) protein (410aa)
Candidate UDP-galactopyranose mutase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVK6_RAMTT
glf; UDP-galactopyranose mutase
Candidate UDP-galactopyranose mutase {ECO:0000313|EMBL:AEG91582.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_7427920_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31581..32408)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Caldimonas manganoxidans RepID=UPI00035F1566
ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 64 in total

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