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A3-18-all-fractions_k255_7626657

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7626657_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..255
-----------------
DNA (255bp)
protein (85aa)
biopolymer transporter ExbD n=1 Tax=Massilia niastensis RepID=UPI00037C31E8
Biopolymer transporter ExbD {ECO:0000313|EMBL:KGF81390.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
biopolymer transport ExbD/TolR family protein
A3-18-all-fractions_k255_7626657_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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275..1501
-----------------
DNA (1227bp)
protein (409aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1M7_LEPCP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
A3-18-all-fractions_k255_7626657_3
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1555..2322)
-----------------
DNA (768bp)
protein (256aa)
short-chain dehydrogenase (EC:1.1.1.35)
Short-chain alcohol dehydrogenase like protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS04_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDS55149.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
A3-18-all-fractions_k255_7626657_4
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2337..2990)
-----------------
DNA (654bp)
protein (218aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
adenylate kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003467121
A3-18-all-fractions_k255_7626657_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3097..3861)
-----------------
DNA (765bp)
protein (255aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035DD2F9
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7626657_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3858..4061)
-----------------
DNA (204bp)
protein (68aa)
UPF0434 protein AXYL_04144 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HV26_ACHXA
trm112p-like family protein
UPF0434 protein AXYL_04144 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
A3-18-all-fractions_k255_7626657_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4042..5094)
-----------------
DNA (1053bp)
protein (351aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.4.1.182)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS00_9BURK
A3-18-all-fractions_k255_7626657_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5112..5540)
-----------------
DNA (429bp)
protein (143aa)
Biopolymer transport protein ExbD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU51_RUBGI
exbD; biopolymer transport protein ExbD
Biopolymer transport protein {ECO:0000313|EMBL:EHR72317.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_7626657_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5556..6191)
-----------------
DNA (636bp)
protein (212aa)
Biopolymer transport protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRZ8_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EHR72316.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
biopolymer transport exbB-like transmembrane protein
A3-18-all-fractions_k255_7626657_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6534..7835
-----------------
DNA (1302bp)
protein (434aa)
xseA_sodB; exodeoxyribonuclease 7 large subunit/superoxide dismutase (EC:1.15.1.1 3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU49_RUBGI
A3-18-all-fractions_k255_7626657_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7958..8539
-----------------
DNA (582bp)
protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Superoxide dismutase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZS3_RAMTT
sodB; superoxide dismutase
A3-18-all-fractions_k255_7626657_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8621..9073)
-----------------
DNA (453bp)
protein (151aa)
Exported protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIP6_METPP
hypothetical protein
Exported protein {ECO:0000313|EMBL:ABM95435.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_7626657_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9201..9551)
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZB2_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93282.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_7626657_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9576..10829
-----------------
DNA (1254bp)
protein (418aa)
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIN4_METPP
A3-18-all-fractions_k255_7626657_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10923..11201)
-----------------
DNA (279bp)
protein (93aa)
Cold shock protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU24_RUBGI
csp; cold shock protein
Cold shock protein {ECO:0000313|EMBL:BAL96511.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_7626657_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11568..11795
-----------------
DNA (228bp)
protein (76aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV61_9BURK
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
clpS; ATP-dependent Clp protease adapter protein ClpS
A3-18-all-fractions_k255_7626657_17
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11792..14092
-----------------
DNA (2301bp)
protein (767aa)
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:ABM95416.1}; EC=3.4.21.92 {ECO:0000313|EMBL:ABM95416.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIM7_METPP
A3-18-all-fractions_k255_7626657_18
unknown

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comp(14173..14430)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

A3-18-all-fractions_k255_7626657_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14595..15521)
-----------------
DNA (927bp)
protein (309aa)
stomatin 2 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BF90D
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:EHR71510.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
SPFH domain-containing protein/band 7 family protein
A3-18-all-fractions_k255_7626657_20
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15531..15971)
-----------------
DNA (441bp)
protein (147aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH45_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWS59737.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_7626657_21
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16083..16931
-----------------
DNA (849bp)
protein (283aa)
orn/lys/arg decarboxylase (EC:4.1.1.-)
Orn/lys/arg decarboxylase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT31_RUBGI
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
Displaying 21 items

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