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A3-18-all-fractions_k255_168191

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_168191_1
unknown

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289..492
DNA (204bp) protein (68aa)

This feature has no annotations

A3-18-all-fractions_k255_168191_2
RLO_PLX_64_10, Bacteria

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525..1445
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B42222
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
A3-18-all-fractions_k255_168191_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1387..3156
DNA (1770bp) protein (590aa)
Diguanylate cyclase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1A9_NITHN
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADE16461.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
A3-18-all-fractions_k255_168191_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3149..5107)
DNA (1959bp) protein (653aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037836CE
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EGJ09525.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
methyl-accepting chemotaxis sensory transducer
A3-18-all-fractions_k255_168191_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5329..6258
DNA (930bp) protein (310aa)
Porin Gram-negative type n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6J5_LEPCP
porin
Porin Gram-negative type {ECO:0000313|EMBL:ACB34831.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_168191_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6332..7543)
DNA (1212bp) protein (404aa)
histidine kinase n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039F3CA1
two-component system sensor protein
Two-component system sensor-response regulator hybrid protein {ECO:0000313|EMBL:AEL05925.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
A3-18-all-fractions_k255_168191_7

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comp(7576..8367)
DNA (792bp) protein (264aa)
Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) {ECO:0000313|EMBL:CBH97378.1}; EC=5.3.1.1 {ECO:0000313|EMBL:CBH97378.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) n=1 Tax=mine drainage metagenome RepID=E6PR23_9ZZZZ
triosephosphate isomerase
A3-18-all-fractions_k255_168191_8
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8364..9512)
DNA (1149bp) protein (383aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FM7_POLSJ
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE42665.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9519..10502)
DNA (984bp) protein (328aa)
dihydroxyacetone kinase subunit DhaK (EC:2.7.1.29)
Dihydroxyacetone kinase DhaK subunit {ECO:0000313|EMBL:ABE42664.1}; EC=2.7.1.121 {ECO:0000313|EMBL:ABE42664.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Dihydroxyacetone kinase DhaK subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FM8_POLSJ
A3-18-all-fractions_k255_168191_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10499..11137)
DNA (639bp) protein (213aa)
Dihydroxyacetone kinase DhaL subunit {ECO:0000313|EMBL:ABE42663.1}; EC=2.7.1.121 {ECO:0000313|EMBL:ABE42663.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Dihydroxyacetone kinase DhaL subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FM9_POLSJ
dihydroxyacetone kinase subunit L
A3-18-all-fractions_k255_168191_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11148..12158)
DNA (1011bp) protein (337aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN0_POLSJ
ABC transporter-like protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ABE42662.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12151..13257)
DNA (1107bp) protein (369aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN1_POLSJ
ABC transporter-like protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ABE42661.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_13
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13260..13427)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN2_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE42660.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13424..14371)
DNA (948bp) protein (316aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN3_POLSJ
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:ABE42659.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14368..15270)
DNA (903bp) protein (301aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN4_POLSJ
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABE42658.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_16
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15405..16739)
DNA (1335bp) protein (445aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN5_POLSJ
extracellular solute-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABE42657.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16902..17936
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FN6_POLSJ
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABE42656.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A3-18-all-fractions_k255_168191_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17986..18969
DNA (984bp) protein (328aa)
dihydroxyacetone kinase subunit DhaK (EC:2.7.1.29)
Dihydroxyacetone kinase DhaK subunit {ECO:0000313|EMBL:ABE42664.1}; EC=2.7.1.121 {ECO:0000313|EMBL:ABE42664.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Dihydroxyacetone kinase DhaK subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FM8_POLSJ
A3-18-all-fractions_k255_168191_19
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19395..19817
DNA (423bp) protein (141aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYU1_LEPCP
type IV-A pilus assembly ATPase PilB
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:ACB32825.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Displaying 19 items

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