ggKbase home page

A3-18-all-fractions_k255_3022346

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_3022346_1
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..159
DNA (159bp) protein (53aa)
cheR; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003655784
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_3022346_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209..895
DNA (687bp) protein (229aa)
chemotaxis protein CheD n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B0445
cheD; chemoreceptor glutamine deamidase CheD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_3022346_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

923..2008
DNA (1086bp) protein (362aa)
cheB; chemotaxis response regulator (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJB7_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_3022346_4
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2430..3515
DNA (1086bp) protein (362aa)
Putative methyltransferase n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YR24_9PROT
Putative methyltransferase {ECO:0000313|EMBL:ESS14117.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
methylase
A3-18-all-fractions_k255_3022346_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3512..4081
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWX8_VARPE
GCN5-like N-acetyltransferaser
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU36523.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-18-all-fractions_k255_3022346_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4184..4567)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034B7806
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:AJE19766.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
A3-18-all-fractions_k255_3022346_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4720..5721
DNA (1002bp) protein (334aa)
sugar ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037F236B
periplasmic binding protein/LacI transcriptional regulator
Putative ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:AGU50530.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-18-all-fractions_k255_3022346_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5723..6727
DNA (1005bp) protein (335aa)
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS20_VARPS
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16721.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
inner-membrane translocator
A3-18-all-fractions_k255_3022346_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6727..7527
DNA (801bp) protein (267aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023766EC
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
A3-18-all-fractions_k255_3022346_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7527..8750
DNA (1224bp) protein (408aa)
Transcriptional regulator/sugar kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTN8_9BURK
ROK family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_3022346_11
unknown

Not on your lists

9226..10173
DNA (948bp) protein (316aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_12
unknown

Not on your lists

10240..10467
DNA (228bp) protein (76aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_13
unknown

Not on your lists

comp(10468..10881)
DNA (414bp) protein (138aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_14
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10917..11273)
DNA (357bp) protein (119aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=F2ZCW4_9PSED
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EGI00254.1}; TaxID=563797 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas coronafaciens.;" source="Pseudomonas coronafaciens pv. oryzae str. 1_6.;"
glutathione-dependent formaldehyde-activating protein
A3-18-all-fractions_k255_3022346_15
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12859)
DNA (1572bp) protein (524aa)
Proton/peptide symporter family protein n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S8A9_SHEAM
proton/peptide symporter family protein
Proton/peptide symporter family protein {ECO:0000313|EMBL:ABM00616.1}; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
A3-18-all-fractions_k255_3022346_16
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12988..13338)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GD82_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78719.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
A3-18-all-fractions_k255_3022346_17
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13412..14101)
DNA (690bp) protein (230aa)
lipoprotein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_3022346_18
unknown

Not on your lists

14319..14672
DNA (354bp) protein (118aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14753..15712
DNA (960bp) protein (320aa)
Putative dehydrogenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVH5_9BURK
Putative dehydrogenase {ECO:0000313|EMBL:EHR69485.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
oxidoreductase-like
A3-18-all-fractions_k255_3022346_20
unknown

Not on your lists

16385..16573
DNA (189bp) protein (63aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_21

Not on your lists

16763..17053
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036312D5
Uncharacterized protein {ECO:0000313|EMBL:EQD78934.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
A3-18-all-fractions_k255_3022346_22
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17981..18427
DNA (447bp) protein (149aa)
activator of HSP90 ATPase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B678E6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
A3-18-all-fractions_k255_3022346_23
unknown

Not on your lists

comp(19014..19232)
DNA (219bp) protein (73aa)

This feature has no annotations

A3-18-all-fractions_k255_3022346_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19499..20593)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037DEEE0
Uncharacterized protein {ECO:0000313|EMBL:AHY58386.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
penicillin-binding protein, beta-lactamase class C
A3-18-all-fractions_k255_3022346_25
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20726..21046)
DNA (321bp) protein (107aa)
Sulfite dehydrogenase (Cytochrome) subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0Q3T5_9RHOO
sorB; sulfite dehydrogenase (cytochrome) subunit
Sulfite dehydrogenase (Cytochrome) subunit {ECO:0000313|EMBL:BAL24823.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
A3-18-all-fractions_k255_3022346_26
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21058..22290)
DNA (1233bp) protein (411aa)
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein (EC:1.8.2.1)
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:AAZ62443.1}; EC=1.8.2.1 {ECO:0000313|EMBL:AAZ62443.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46WP0_CUPPJ
A3-18-all-fractions_k255_3022346_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22478..23683
DNA (1206bp) protein (402aa)
Rhodanese-related sulfurtransferase n=1 Tax=Acidovorax sp. CF316 RepID=J0UDX9_9BURK
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EJE54352.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
A3-18-all-fractions_k255_3022346_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23831..25606)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000360DEB8
Permease {ECO:0000313|EMBL:KIZ40377.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TrkA family protein
A3-18-all-fractions_k255_3022346_29
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25721..26515
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0003725269
Methyltransferase type 11 {ECO:0000313|EMBL:KIF81372.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
type 11 methyltransferase
A3-18-all-fractions_k255_3022346_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26512..27891)
DNA (1380bp) protein (460aa)
sensor protein (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Sensor protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPY4_RUBGI
Displaying items 1-30 of 33 in total

View Taxonomy