ggKbase home page

A3-18-all-fractions_k255_4142583

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_4142583_1
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..165)
-----------------
DNA (165bp)
protein (55aa)
thioredoxin reductase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E9E352
Thioredoxin reductase {ECO:0000313|EMBL:ENZ94531.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
Thioredoxin reductase
A3-18-all-fractions_k255_4142583_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182..871
-----------------
DNA (690bp)
protein (230aa)
cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Polaromonas sp. CF318 RepID=J3D2B6_9BURK
Thioredoxin reductase {ECO:0000313|EMBL:EJL83096.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
A3-18-all-fractions_k255_4142583_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

991..1920
-----------------
DNA (930bp)
protein (310aa)
Putative oxidoreductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Z5_PELHB
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AEQ50290.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
A3-18-all-fractions_k255_4142583_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1932..2669)
-----------------
DNA (738bp)
protein (246aa)
NUDIX hydrolase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ATL5_DELSC
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEF87879.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
A3-18-all-fractions_k255_4142583_5
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..5047)
-----------------
DNA (2364bp)
protein (788aa)
Methyl-accepting chemotaxis protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NEN2_9BURK
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGX88614.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
A3-18-all-fractions_k255_4142583_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5097..6797)
-----------------
DNA (1701bp)
protein (567aa)
NAD+ synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002378635
NAD+ synthetase
Tax=GWA2_Burkholderiales_64_37_curated
A3-18-all-fractions_k255_4142583_7
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6810..8015)
-----------------
DNA (1206bp)
protein (402aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
pncB2; nicotinate phosphoribosyltransferase PncB (EC:2.4.2.11)
nicotinate phosphoribosyltransferase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035DA0E8
A3-18-all-fractions_k255_4142583_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8041..8901)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DCM1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL89239.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
A3-18-all-fractions_k255_4142583_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9043..9306
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ34_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35620.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
A3-18-all-fractions_k255_4142583_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9303..10175
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZU9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON12743.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
nickel/cobalt efflux protein RcnA
A3-18-all-fractions_k255_4142583_11
unknown

Not on your lists

comp(10207..10704)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

A3-18-all-fractions_k255_4142583_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10888..12393)
-----------------
DNA (1506bp)
protein (502aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037AC80A
Transcriptional regulator {ECO:0000313|EMBL:GAD20481.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transcriptional regulator
A3-18-all-fractions_k255_4142583_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12613..14181
-----------------
DNA (1569bp)
protein (523aa)
Methyl-accepting chemotaxis protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ES01_9BURK
Membrane protein {ECO:0000313|EMBL:KJA11253.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
mcp; methyl-accepting chemotaxis protein
A3-18-all-fractions_k255_4142583_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14319..15695
-----------------
DNA (1377bp)
protein (459aa)
Putative erythromycin esterase n=1 Tax=Variovorax paradoxus B4 RepID=T1X9Q8_VARPD
putative erythromycin esterase
Putative erythromycin esterase {ECO:0000313|EMBL:AGU49206.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-18-all-fractions_k255_4142583_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15747..16124
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B88DB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
A3-18-all-fractions_k255_4142583_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16150..17106)
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEB3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93902.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4142583_17
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17262..18056)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEB3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93902.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4142583_18
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18395..19219)
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEB3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93902.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4142583_19
unknown

Not on your lists

19616..20212
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

A3-18-all-fractions_k255_4142583_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20187..20648)
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003451B2C
GNAT family acetyltransferase {ECO:0000313|EMBL:KGF78186.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
N-acetyltransferase GCN5
A3-18-all-fractions_k255_4142583_21

Not on your lists

comp(20687..22336)
-----------------
DNA (1650bp)
protein (550aa)
Phosphoglucomutase {ECO:0000313|EMBL:CBH97975.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CBH97975.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Phosphoglucomutase n=1 Tax=mine drainage metagenome RepID=E6PSR8_9ZZZZ
phosphoglucomutase, alpha-D-glucose phosphate-specific
A3-18-all-fractions_k255_4142583_22
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22348..23976)
-----------------
DNA (1629bp)
protein (543aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] id=12493129 bin=THIO_HI species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
glucose-6-phosphate isomerase
A3-18-all-fractions_k255_4142583_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23976..25409)
-----------------
DNA (1434bp)
protein (478aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC18_SINAD
glucose-6-phosphate 1-dehydrogenase
A3-18-all-fractions_k255_4142583_24
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25596..26597)
-----------------
DNA (1002bp)
protein (334aa)
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ABM39774.1}; EC=1.1.1.44 {ECO:0000313|EMBL:ABM39774.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVU6_POLNA
6-phosphogluconate dehydrogenase
A3-18-all-fractions_k255_4142583_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26839..27108
-----------------
DNA (270bp)
protein (90aa)
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
fructose-bisphosphate aldolase n=1 Tax=Variovorax paradoxus RepID=UPI00035F8ABE
fructose-bisphosphate aldolase class-i
Displaying 25 items

View Taxonomy