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A3-18-all-fractions_k255_4839616

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_4839616_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346EB73
Uncharacterized protein {ECO:0000313|EMBL:KDB54230.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
A3-18-all-fractions_k255_4839616_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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389..1006
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJP4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70399.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_4839616_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1083..2210
DNA (1128bp) protein (376aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6F0_LEPCP
A3-18-all-fractions_k255_4839616_4

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2207..2656
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5D457
Uncharacterized protein {ECO:0000313|EMBL:KKN88460.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RDD domain-containing protein
A3-18-all-fractions_k255_4839616_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3039..3434
DNA (396bp) protein (132aa)
glyoxalase n=1 Tax=Zavarzinella formosa RepID=UPI0002EA0AFC
glyoxalase
Tax=BJP_08E140C01_Xanthomonadales_64_42
A3-18-all-fractions_k255_4839616_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3431..4633)
DNA (1203bp) protein (401aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.16)
Beta-ketoadipyl CoA thiolase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1T6_LEPCP
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_4839616_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4839..6134
DNA (1296bp) protein (432aa)
phosphohydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B6D730
putative HD-GYP hydrolase domain containing protein
Putative HD-GYP hydrolase domain containing protein {ECO:0000313|EMBL:BAL97772.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_4839616_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6131..8194
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C322C
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_4839616_9
unknown

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comp(8213..8380)
DNA (168bp) protein (56aa)

This feature has no annotations

A3-18-all-fractions_k255_4839616_10
unknown

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8544..8744
DNA (201bp) protein (67aa)

This feature has no annotations

A3-18-all-fractions_k255_4839616_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8741..9214
DNA (474bp) protein (158aa)
Response regulator receiver domain-containing protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW00_9BURK
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EGJ12518.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
response regulator receiver domain-containing protein
A3-18-all-fractions_k255_4839616_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9443..9811
DNA (369bp) protein (123aa)
hypothetical protein
hypothetical protein id=5079307 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_4839616_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9914..10216
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ79_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73298.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_4839616_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10238..10933
DNA (696bp) protein (232aa)
phosphoglycerate mutase (EC:5.4.2.1)
phosphoglycerate mutase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034888D3
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_4839616_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11045..11827)
DNA (783bp) protein (261aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXM3_RUBGI
Displaying 15 items

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