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A3-18-all-fractions_k255_5990081

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5990081_1
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..457)
DNA (456bp) protein (152aa)
Putative secreted substrate binding protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH59_METPP
secreted substrate binding protein
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:EWS58420.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_5990081_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(796..1377)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRZ6_9BURK
A3-18-all-fractions_k255_5990081_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1510..2937)
DNA (1428bp) protein (476aa)
xseA_sodB; exodeoxyribonuclease 7 large subunit/superoxide dismutase (EC:1.15.1.1 3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU49_RUBGI
A3-18-all-fractions_k255_5990081_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3360..3998
DNA (639bp) protein (213aa)
flagellar motor protein MotA, partial n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B464A9
Biopolymer transport protein {ECO:0000313|EMBL:EHR72316.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
biopolymer transport exbB-like transmembrane protein
A3-18-all-fractions_k255_5990081_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3995..4426
DNA (432bp) protein (144aa)
Biopolymer transport protein ExbD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU51_RUBGI
exbD; biopolymer transport protein ExbD
Biopolymer transport protein ExbD {ECO:0000313|EMBL:BAL96538.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_5990081_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4481..5554
DNA (1074bp) protein (358aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lpxK; tetraacyldisaccharide 4'-kinase LpxK (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQU7_9BURK
A3-18-all-fractions_k255_5990081_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5591..5806
DNA (216bp) protein (72aa)
UPF0434 protein BurJ1DRAFT_3512 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS01_9BURK
UPF0434 protein BurJ1DRAFT_3512 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_5990081_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5817..6596
DNA (780bp) protein (260aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase KdsB (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQU5_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_5990081_9
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6791..7447
DNA (657bp) protein (219aa)
adk; adenylate kinase (EC:2.7.4.3)
adenylate kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003467121
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_5990081_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7625..8383
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CSI9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL77619.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase sdr
A3-18-all-fractions_k255_5990081_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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8492..10171
DNA (1680bp) protein (560aa)
Sulfotransferase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2G2B8_9GAMM
tpr domain protein
Tpr domain protein {ECO:0000313|EMBL:AIE86487.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
A3-18-all-fractions_k255_5990081_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10304..13057)
DNA (2754bp) protein (918aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035F3EB3
tonB-dependent Receptor Plug domain protein
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:CDG84932.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
A3-18-all-fractions_k255_5990081_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13436..15298)
DNA (1863bp) protein (621aa)
ATPase component ABC-type dipeptide/oligopeptide/nickel transport system n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQU0_9BURK
ATPase component ABC-type dipeptide/oligopeptide/nickel transport system {ECO:0000313|EMBL:EGJ10708.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter ATP-binding protein
A3-18-all-fractions_k255_5990081_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15305..16759)
DNA (1455bp) protein (485aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQT9_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGJ10707.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter permease
A3-18-all-fractions_k255_5990081_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16769..17020)
DNA (252bp) protein (84aa)
IM pore protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQT8_9BURK
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 15 items

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