ggKbase home page

A3-18-all-fractions_k255_6525838

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_6525838_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..765
DNA (765bp) protein (255aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000313|EMBL:BAL97535.1}; EC=3.5.2.3 {ECO:0000313|EMBL:BAL97535.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Dihydroorotase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ8_RUBGI
A3-18-all-fractions_k255_6525838_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

762..1511
DNA (750bp) protein (250aa)
lyso-ornithine lipid acyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B3BC93
phospholipid/glycerol acyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_6525838_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1561..2043
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SII6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95375.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_6525838_4
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2051..3358)
DNA (1308bp) protein (436aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4M0_9NEIS
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEG08102.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
major facilitator superfamily transporter
A3-18-all-fractions_k255_6525838_5
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3433..4326
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037042E3
Transcriptional regulator YnfL {ECO:0000313|EMBL:ERO57732.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;"
LysR family transcriptional regulator
A3-18-all-fractions_k255_6525838_6
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4347..5345)
DNA (999bp) protein (333aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
peptidylprolyl isomerase; exported protein (EC:5.2.1.8)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Burkholderia sp. H160 RepID=B5WBR3_9BURK
A3-18-all-fractions_k255_6525838_7
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5342..6085)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBY3_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX48599.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
A3-18-all-fractions_k255_6525838_8
unknown

Not on your lists

comp(6220..6651)
DNA (432bp) protein (144aa)

This feature has no annotations

A3-18-all-fractions_k255_6525838_9
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7412)
DNA (747bp) protein (249aa)
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ4_RUBGI
A3-18-all-fractions_k255_6525838_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7509..7931
DNA (423bp) protein (141aa)
Rhodanese domain protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ3_RUBGI
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:BAL97530.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_6525838_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8046..8303
DNA (258bp) protein (86aa)
Glutaredoxin 3 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK33_9BURK
grxC; glutaredoxin-3 GrxC
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_6525838_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8401..8868
DNA (468bp) protein (156aa)
Protein-export protein SecB n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK32_9BURK
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secB; preprotein translocase SecB subunit
A3-18-all-fractions_k255_6525838_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8978..9961
DNA (984bp) protein (328aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIW1_9BURK
A3-18-all-fractions_k255_6525838_14
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10082..10546)
DNA (465bp) protein (155aa)
TrmH family RNA methyltransferase (EC:2.1.1.-)
tRNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BA6B3
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_6525838_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10622..11326)
DNA (705bp) protein (235aa)
Putative amidophosphoribosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIV9_9BURK
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EHR73015.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phosphoribosyltransferase
A3-18-all-fractions_k255_6525838_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11394..12374
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIV8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73014.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
bioC; putative biotin synthesis protein BioC
A3-18-all-fractions_k255_6525838_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12584..13705
DNA (1122bp) protein (374aa)
ctaC; cytochrome c oxidase subunit 2 CtaC (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIV6_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 17 items

View Taxonomy