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A3-18-all-fractions_k255_7386802

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7386802_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(106..642)
DNA (537bp) protein (179aa)
chemotaxis protein CheW n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C0FE7
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EHR73036.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
CheW protein
A3-18-all-fractions_k255_7386802_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(699..1064)
DNA (366bp) protein (122aa)
chemotaxis protein CheY n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003492DE8
response regulator receiver domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7386802_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1157..1576)
DNA (420bp) protein (140aa)
pilus response regulator PilG n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B58E3D
pilG; twitching motility, CheY-like protein PilG
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7386802_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1928..2875
DNA (948bp) protein (316aa)
phosphomethylpyrimidine kinase type-1 (EC:2.7.1.49 2.7.4.7)
Phosphomethylpyrimidine kinase type-1 {ECO:0000313|EMBL:BAL97549.1}; EC=2.7.1.49 {ECO:0000313|EMBL:BAL97549.1};; EC=2.7.4.7 {ECO:0000313|EMBL:BAL97549.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
phosphomethylpyrimidine kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DD149
A3-18-all-fractions_k255_7386802_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2865..4163
DNA (1299bp) protein (433aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIY5_9BURK
glutamate-1-semialdehyde aminotransferase
A3-18-all-fractions_k255_7386802_6
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4167..5009
DNA (843bp) protein (281aa)
aldose 1-epimerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C5D6A
Aldose 1-epimerase {ECO:0000313|EMBL:KDB52622.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
aldose 1-epimerase
A3-18-all-fractions_k255_7386802_7
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5213..6595
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DB887
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:KDB52608.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
A3-18-all-fractions_k255_7386802_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6597..7178
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y8G6_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7386802_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7420..8028
DNA (609bp) protein (203aa)
PEP motif anchor domain-containing protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002887FA7
Uncharacterized protein {ECO:0000313|EMBL:EZP40435.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
PEP-CTERM putative exosortase interaction domain protein
A3-18-all-fractions_k255_7386802_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8214..10217
DNA (2004bp) protein (668aa)
ribonuclease II (RNB)-like protein (EC:3.1.13.1)
ribonuclease II n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B42948
Ribonuclease II {ECO:0000313|EMBL:EGJ11078.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_7386802_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10245..11171
DNA (927bp) protein (309aa)
cell envelope biogenesis protein TonB n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003488640
TonB family protein {ECO:0000313|EMBL:EHR73046.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TonB family protein
A3-18-all-fractions_k255_7386802_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11175..12047
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW2_9BURK
A3-18-all-fractions_k255_7386802_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12044..12811
DNA (768bp) protein (256aa)
peptidoglycan transglycosylase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034AC09C
monofunctional biosynthetic peptidoglycan transglycosylase
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000313|EMBL:ACB36236.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_7386802_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12903..13502
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11082.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_7386802_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13499..14068
DNA (570bp) protein (190aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW5_9BURK
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EGJ11083.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transmembrane thioredoxin-related protein
A3-18-all-fractions_k255_7386802_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14281..14724
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003616B21
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_7386802_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14793..15266
DNA (474bp) protein (158aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LQ45_9BURK
biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EJL87438.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
A3-18-all-fractions_k255_7386802_18
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15278..16627
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase, biotin carboxylase AccC (EC:6.3.4.14 6.4.1.2)
Putative biotin carboxylase protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN2_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_7386802_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16627..17535
DNA (909bp) protein (303aa)
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX26_RUBGI
A3-18-all-fractions_k255_7386802_20
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17743..19263
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00030BB951
Zinc finger-domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_7386802_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19297..20202
DNA (906bp) protein (302aa)
sugar kinase transferase (EC:2.7.1.-)
sugar kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003461E8E
Sugar kinase, ribokinase {ECO:0000313|EMBL:EHR73055.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_7386802_22
unknown

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20216..20371
DNA (156bp) protein (52aa)

This feature has no annotations

A3-18-all-fractions_k255_7386802_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20751..21071)
DNA (321bp) protein (107aa)
UPF0235 protein RBXJA2T_02622 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLH1_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_7386802_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21313..21816)
DNA (504bp) protein (168aa)
Putative histone H1/H5 family protein, HCT subfamily n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNI9_VARPS
Variovorax paradoxus strain MEDvA23 contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34169.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
histone H1/H5 family protein, HCT subfamily
A3-18-all-fractions_k255_7386802_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22048..22170)
DNA (123bp) protein (41aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVF0_9BURK
Displaying 25 items

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