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A3-18-all-fractions_k255_7931476

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_7931476_1
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..2217
DNA (2217bp) protein (739aa)
TonB-dependent receptor n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39HX3_BURS3
Ligand-gated channel {ECO:0000313|EMBL:KDV26550.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
TonB-dependent receptor
A3-18-all-fractions_k255_7931476_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2221..3357
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000369DE33
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AIB14611.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
A3-18-all-fractions_k255_7931476_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3377..5332
DNA (1956bp) protein (652aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDZ3_PHEZH
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACG78426.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A3-18-all-fractions_k255_7931476_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5338..6675
DNA (1338bp) protein (446aa)
Amino acid/peptide transporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDZ1_PHEZH
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ACG78424.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A3-18-all-fractions_k255_7931476_5
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6672..7670
DNA (999bp) protein (333aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Novosphingobium sp. AP12 RepID=J2H5Z8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGE08040.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
renal dipeptidase superfamily
A3-18-all-fractions_k255_7931476_6
unknown

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comp(7690..8199)
DNA (510bp) protein (170aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8333..9316)
DNA (984bp) protein (328aa)
Serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:ABM92988.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABM92988.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Serine O-acetyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBP9_METPP
A3-18-all-fractions_k255_7931476_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9416..10423)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F23
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
A3-18-all-fractions_k255_7931476_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10492..11097
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375F22
TetR family transcriptional regulator
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
A3-18-all-fractions_k255_7931476_10
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11097..11408
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AD7B2
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:KIG05534.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
nuclease
A3-18-all-fractions_k255_7931476_11
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11390..13243)
DNA (1854bp) protein (618aa)
Putative ATPase {ECO:0000313|EMBL:KDR95967.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
A3-18-all-fractions_k255_7931476_12
unknown

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comp(13240..13443)
DNA (204bp) protein (68aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_13
unknown

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comp(13440..14177)
DNA (738bp) protein (246aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14366..16522
DNA (2157bp) protein (719aa)
TonB-dependent receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPQ5_VARPS
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACS17776.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-18-all-fractions_k255_7931476_15
unknown

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comp(16588..16962)
DNA (375bp) protein (125aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17393..18361
DNA (969bp) protein (323aa)
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16315.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein id=5082161 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
A3-18-all-fractions_k255_7931476_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18472..19053
DNA (582bp) protein (194aa)
hypothetical protein id=5082162 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hemerythrin hhE cation binding domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
A3-18-all-fractions_k255_7931476_18
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19241..21868
DNA (2628bp) protein (876aa)
2-oxoglutarate dehydrogenase, E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:AJK50831.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AJK50831.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003460BDC
A3-18-all-fractions_k255_7931476_19
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21872..24709)
DNA (2838bp) protein (946aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZ98_GEODF
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Sensor diguanylate cyclase/phosphodiesterase, Cache_1, HAMP and PAS domain-containing {ECO:0000313|EMBL:ACM20651.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
A3-18-all-fractions_k255_7931476_20
unknown

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comp(24818..26911)
DNA (2094bp) protein (698aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_21
unknown

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comp(26965..27900)
DNA (936bp) protein (312aa)

This feature has no annotations

A3-18-all-fractions_k255_7931476_22
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28020..29402)
DNA (1383bp) protein (461aa)
copper oxidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C8AF2
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:ACC71218.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
A3-18-all-fractions_k255_7931476_23
unknown

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comp(29399..29488)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 23 items

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