ggKbase home page

H1-16-all-fractions_k255_1354905

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_1354905_1
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..793)
-----------------
DNA (792bp)
protein (264aa)
UPI0003C7F5F8 related cluster n=1 Tax=unknown RepID=UPI0003C7F5F8
Putative glycosyltransferase {ECO:0000313|EMBL:CCH73787.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
glycosyl transferase
H1-16-all-fractions_k255_1354905_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

796..1905
-----------------
DNA (1110bp)
protein (370aa)
Peptidase M20 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F934_CONWI
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ADB53029.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-16-all-fractions_k255_1354905_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1856..3349
-----------------
DNA (1494bp)
protein (498aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F933_CONWI
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ADB53028.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-16-all-fractions_k255_1354905_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3384..4655
-----------------
DNA (1272bp)
protein (424aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADB53027.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADB53027.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Nucleotide sugar dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F932_CONWI
H1-16-all-fractions_k255_1354905_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4660..5718
-----------------
DNA (1059bp)
protein (353aa)
Nucleotidyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F931_CONWI
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ADB53026.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-16-all-fractions_k255_1354905_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5715..6773
-----------------
DNA (1059bp)
protein (353aa)
Glucose-6-phosphate isomerase archaeal II {ECO:0000313|EMBL:EHN11437.1}; EC=5.3.1.9 {ECO:0000313|EMBL:EHN11437.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
phosphate starvation-inducible protein PsiE n=1 Tax=Patulibacter americanus RepID=UPI0003B50A9C
H1-16-all-fractions_k255_1354905_7
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6852..9701
-----------------
DNA (2850bp)
protein (950aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WG55_KINRD
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ABS05794.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
H1-16-all-fractions_k255_1354905_8
unknown

Not on your lists

comp(9698..10084)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

H1-16-all-fractions_k255_1354905_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10191..11414)
-----------------
DNA (1224bp)
protein (408aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6T4_9ACTO
SARP family transcriptional regulator
Transcriptional regulator, SARP family {ECO:0000313|EMBL:ABW14820.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
H1-16-all-fractions_k255_1354905_10

Not on your lists

11656..12252
-----------------
DNA (597bp)
protein (199aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured prokaryote RepID=H5SL68_9ZZZZ
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:BAL56904.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
ECF subfamily RNA polymerase sigma-24 factor
H1-16-all-fractions_k255_1354905_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12287..13084
-----------------
DNA (798bp)
protein (266aa)
Putative glycosyltransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARI8_STRRD
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:ACZ90328.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H1-16-all-fractions_k255_1354905_12
unknown

Not on your lists

13107..13358
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

H1-16-all-fractions_k255_1354905_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13355..14011)
-----------------
DNA (657bp)
protein (219aa)
Two-component system LuxR family transcriptional regulator n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCW0_9CHLR
DNA-binding response regulator, LuxR family protein {ECO:0000313|EMBL:KFE68279.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
LuxR family transcriptional regulator
H1-16-all-fractions_k255_1354905_14

Not on your lists

comp(14079..15014)
-----------------
DNA (936bp)
protein (312aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. CN3 RepID=G6H9D6_9ACTO
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:AGC72828.1}; TaxID=1256545 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1246.;"
family 2 glycosyl transferase
H1-16-all-fractions_k255_1354905_15
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(15011..16570)
-----------------
DNA (1560bp)
protein (520aa)
polysaccharide biosynthesis protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E86 id=5224946 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein involved in the export of O-antigen and teichoic acid
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
H1-16-all-fractions_k255_1354905_16
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(16567..17787)
-----------------
DNA (1221bp)
protein (407aa)
Glycosyl transferase group 1 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDW3_9CHLR
Glycosyl transferase group 1 {ECO:0000313|EMBL:CCF82875.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
group 1 glycosyl transferase
H1-16-all-fractions_k255_1354905_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17846..18952)
-----------------
DNA (1107bp)
protein (369aa)
Glycosyl transferase group 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U596_9CHLR
group 1 glycosyl transferase
Tax=RBG_16_Chloroflexi_56_8_curated
H1-16-all-fractions_k255_1354905_18
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18949..19770)
-----------------
DNA (822bp)
protein (274aa)
Uncharacterized protein n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KPQ3_9ACTO
putative LmbE family protein
Putative LmbE family protein {ECO:0000313|EMBL:AJK46708.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
H1-16-all-fractions_k255_1354905_19
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19871..21025
-----------------
DNA (1155bp)
protein (385aa)
Aminotransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPA5_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD04393.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
H1-16-all-fractions_k255_1354905_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21035..22159
-----------------
DNA (1125bp)
protein (375aa)
UPI0003D0548F related cluster n=1 Tax=unknown RepID=UPI0003D0548F
Glycosyl transferase family 1 {ECO:0000313|EMBL:ESX82909.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
H1-16-all-fractions_k255_1354905_21
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

22156..22977
-----------------
DNA (822bp)
protein (274aa)
Methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT55_9GAMM
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
H1-16-all-fractions_k255_1354905_22
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

23011..23823
-----------------
DNA (813bp)
protein (271aa)
phosphosulfolactate synthase (EC:4.4.1.19)
Phosphosulfolactate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WZ1_SOLUE
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
H1-16-all-fractions_k255_1354905_23
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

23796..24560
-----------------
DNA (765bp)
protein (255aa)
Phosphosulfolactate phosphohydrolase and related enzyme-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WX3_SOLUE
phosphosulfolactate phosphohydrolase-like protein
Tax=RBG_13_Chloroflexi_53_26_curated
H1-16-all-fractions_k255_1354905_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

24560..25789
-----------------
DNA (1230bp)
protein (410aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WY9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85826.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H1-16-all-fractions_k255_1354905_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25768..26493)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7B9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX60355.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
glycoside hydrolase
H1-16-all-fractions_k255_1354905_26
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(26490..28205)
-----------------
DNA (1716bp)
protein (572aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDX1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82883.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
glycosyltransferase probably involved in cell wall biogenesis-like protein
H1-16-all-fractions_k255_1354905_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

28383..29855
-----------------
DNA (1473bp)
protein (491aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
H1-16-all-fractions_k255_1354905_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(29868..30806)
-----------------
DNA (939bp)
protein (313aa)
Glycosyl transferase family 2 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGK4_ROSCS
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 28 items

View Taxonomy