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H1-16-all-fractions_k255_534583

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_534583_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..746)
DNA (744bp) protein (248aa)
UPI0003CFAFD0 related cluster n=1 Tax=unknown RepID=UPI0003CFAFD0
Putative acyl-CoA synthase {ECO:0000313|EMBL:GAM02957.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
acyl-CoA synthetase
H1-16-all-fractions_k255_534583_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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923..1393
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S699_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51296.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_534583_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1492..2103
DNA (612bp) protein (204aa)
Cold-shock DNA-binding protein family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SL55_9SPHN
cold-shock DNA-binding protein family protein
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:AGH51297.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_534583_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2143..2529
DNA (387bp) protein (129aa)
NADH:ubiquinone oxidoreductase 17.2 kD subunit n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQS0_SPHAL
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AJA10583.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
H1-16-all-fractions_k255_534583_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2526..3140
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A451
Uncharacterized protein {ECO:0000313|EMBL:EKU75443.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
H1-16-all-fractions_k255_534583_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2942..3670)
DNA (729bp) protein (243aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SL61_9SPHN
H1-16-all-fractions_k255_534583_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3730..4065)
DNA (336bp) protein (112aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
arsenate reductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A453
arsenate reductase
H1-16-all-fractions_k255_534583_8
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4062..5312)
DNA (1251bp) protein (417aa)
sugar transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1A6
sugar (and other) transporter family protein
Sugar (And other) transporter family protein {ECO:0000313|EMBL:AJW98760.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
H1-16-all-fractions_k255_534583_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5370..7307)
DNA (1938bp) protein (646aa)
Membrane-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEZ3_SPHWW
hypothetical protein
Membrane-like protein {ECO:0000313|EMBL:ABQ70859.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H1-16-all-fractions_k255_534583_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7312..7866)
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEZ2_SPHWW
LemA family protein
LemA family protein {ECO:0000313|EMBL:ABQ70858.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H1-16-all-fractions_k255_534583_11
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7924..8358)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B399BE
Uncharacterized protein {ECO:0000313|EMBL:AJR26174.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
H1-16-all-fractions_k255_534583_12
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8386..9081
DNA (696bp) protein (232aa)
Putative SAM-dependent methyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z804_SPHJU
Methyltransferase type 12 {ECO:0000313|EMBL:AJR23206.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative SAM-dependent methyltransferase
H1-16-all-fractions_k255_534583_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9217..10176)
DNA (960bp) protein (320aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase n=1 Tax=Caulobacter sp. AP07 RepID=J2GFV2_9CAUL
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase {ECO:0000313|EMBL:EJL28860.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
H1-16-all-fractions_k255_534583_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10181..10393)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ABQ7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL28859.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
H1-16-all-fractions_k255_534583_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10390..12162)
DNA (1773bp) protein (591aa)
Putative carbamoyl transferase, NodU family n=1 Tax=Caulobacter sp. AP07 RepID=J2H0S4_9CAUL
Putative carbamoyl transferase, NodU family {ECO:0000313|EMBL:EJL28858.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
carbamoyltransferase
H1-16-all-fractions_k255_534583_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12162..12557)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035F7DDA
Uncharacterized protein {ECO:0000313|EMBL:EJL28857.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
Displaying 16 items

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